Lacticaseibacillus paracasei subsp. paracasei: LBPC_1808
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Entry
LBPC_1808 CDS
T04768
Name
(GenBank) pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lpap
Lacticaseibacillus paracasei subsp. paracasei
Brite
KEGG Orthology (KO) [BR:
lpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpap03009
]
LBPC_1808
Enzymes [BR:
lpap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LBPC_1808
Ribosome biogenesis [BR:
lpap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LBPC_1808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BAN72104
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All DBs
Position
complement(1900782..1901663)
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AA seq
293 aa
AA seq
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MRYSFTSKVTRSTTVKRWLAEQGVSHRLFKKMLADHLIWVDGQASGNGPVEAGQIIRFEI
PTSKTLTPEFAPLEVIYEDANWLIVSKPAGLTSVPGPHTPNSSLLNRIAGYLVEQKIDAP
QPAIMTRLDRDTVGLVLAAKHPYAQGRFDQAHQRTLTKHYLAVVSGKLPSPKGEIDAPLK
LAADGIHRIVAADGQTALTKYRVLKEKTNTLVDVQLLTGRTHQIRVHFASLGHPLIGDHL
YGQPDARIPYQALQATRLKFTDPFSEKRITAELPVPALFNQLLTEAPQIEPTI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcgatattcatttacgtcaaaggtgacacggtcgacaacggtcaaacgttggctagca
gagcaaggtgtcagtcatcgcttgttcaaaaaaatgctggcagatcatttgatctgggtt
gatgggcaagcatctggcaatggtccggttgaagctggccagattatccgctttgaaatt
ccgactagcaaaacgctgacgccagagtttgcgcctttagaagtcatttatgaagatgct
aattggctaattgtctcaaaaccagctggattgacaagcgttcccggaccccacacaccg
aattcgagtttattgaatcgtattgcgggctatttggttgagcaaaaaattgacgcacca
caaccagccatcatgactcgacttgatcgcgatactgtcggactggtgctggctgcaaaa
catccatacgcacaaggccggtttgatcaagcacatcaacgcacactgacgaagcattac
ttggcggttgtcagcggtaaattgccatccccaaaaggtgaaattgatgcacctctgaaa
ttagcggcggatggcattcaccgaattgtggcagctgatggccagacggcgctgacaaaa
taccgggttttaaaagaaaaaaccaatactttggttgatgtccagttgctgaccggtcgg
acacatcaaattcgcgttcattttgcaagtttaggtcatccattaattggcgatcacctt
tatggtcagccagatgcgcgaataccgtatcaagccttgcaggcgacgcggttgaaattt
acggatcctttttcggaaaagcggattacggctgaattgccggtgccggctttgtttaac
caactgctgacagaagcaccccaaattgagccaacaatctga
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