Lacticaseibacillus paracasei subsp. paracasei: LBPC_1921
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Entry
LBPC_1921 CDS
T04768
Name
(GenBank) DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpap
Lacticaseibacillus paracasei subsp. paracasei
Pathway
lpap03420
Nucleotide excision repair
lpap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LBPC_1921
03430 Mismatch repair
LBPC_1921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpap03400
]
LBPC_1921
Enzymes [BR:
lpap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBPC_1921
DNA repair and recombination proteins [BR:
lpap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBPC_1921
MMR (mismatch excision repair)
Other MMR factors
LBPC_1921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
DEAD
SLFN-g3_helicase
AAA_30
AAA_14
AAA_16
NACHT
FcoT
Motif
Other DBs
NCBI-ProteinID:
BAN72217
LinkDB
All DBs
Position
complement(1999268..2001559)
Genome browser
AA seq
763 aa
AA seq
DB search
MAENEQAKEQTHLTGIMKELSGAESRLSKEMAKTKSEEKNISDNFFNDFSLNFTDYAETI
ETAASIQQQQRVLDERTNAWKQSAQQLATVKRLMGNPYFARIDFQEGREKPETIYIGLGS
FTNEAGKFLIYDWRAPISSIYYDGGLGKVTYQTPDGPQQVTVSLKRQFVIKNGKIQTMFD
TTETIGDQMLLEVLGEKSDTQMKTIVTTIQREQNQIIRDTKADLLFVQGAAGSGKTSAVL
QRVAYLLYRYRGNLSSSQVIMFSPNQLFSDYISNVLPELGEQNMVQFTYYQYVTRRLPHI
DVQNLFSQFEQQLTPVQKKIARVKGSLDFFETAKKYATSLEKSGLRFRDIRFRGEVFFSR
RRIHEIFYSYNENYHMGNRLTATKERLIKMLNRKIESEMKSQWVQEAVENLSGEEIRSMQ
QDGPKEFKNSDDEYRFFARQLVMRGFNEIQQDIVRNRFLNIRGQYVSFLREVPAIYDLEA
EGISADDWQAEVDHFITLFKERQLPMADATPYLHLYDLITGRHGEREMRYVFIDEIQDYT
PYQLAYLKDSFPRAKFTLLGDLNQAIFTKDDSRTLINETSKLFDPEKTRVVQLTQSYRST
KQVTDFTKAILTSGQKIVAFNRQGPLPKLVVRPDEAGLMAALQDQLKINNEAKQTTAVIA
KTLEAAEAIYEQMKAAGIKVTLIKSENQRLAAGVIVVPSFLAKGLEFDAVVLWQINAANY
HEEDERELLYTVASRAMHRLTMLASPDVTPLLDKVPADLYERG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagaacgaacaagcaaaagagcagacacatttgacaggcatcatgaaggagctc
tccggtgccgaaagccgtctttcaaaagagatggctaagacaaagtctgaagagaagaac
atcagtgacaacttcttcaatgatttttccttgaacttcaccgactacgctgaaacgatt
gaaactgcggcctcaatccagcaacagcaacgcgtgcttgatgagcgaaccaatgcgtgg
aagcaaagcgcgcagcaactcgcgactgttaagcggttgatgggcaatccgtattttgcg
cggattgatttccaagaaggccgggaaaagccggagacgatttatatcggcttaggttcc
ttcaccaatgaagctggtaagtttctcatctacgactggcgcgcgccgatcagctcaatt
tactatgatggcggtttgggcaaggttacctatcaaacgcctgatggcccgcaacaggtc
acggtttctttgaagcgtcaatttgtcattaaaaacggcaaaattcagacaatgttcgat
actaccgaaaccatcggcgatcagatgctgctggaagtgttaggcgaaaagtcagacacc
caaatgaagacgattgtgaccacgatccagcgcgaacagaaccagattatccgtgacacc
aaagcggacttattgtttgtgcaaggcgcagctggctccgggaaaaccagtgccgtgttg
cagcgggtcgcttatctgctttatcggtaccggggcaacctgagtagtagtcaggtgatt
atgttcagtcctaaccaacttttctctgactacatcagcaatgttttgccagaacttggc
gaacagaacatggtgcaattcacttattaccaatatgtcacgcgacggttaccacacatt
gacgtccaaaaccttttctctcagttcgagcaacagctaaccccagttcaaaagaaaatt
gcacgtgtcaaaggtagcttagacttttttgagacagccaagaaatatgcgacaagtctt
gaaaaatcaggcttgcgcttccgtgacattcgcttccgtggtgaggtgttcttttcacgc
cggcggattcatgaaatcttttatagctacaacgaaaattatcacatgggcaatcgccta
accgccaccaaggaacggctgatcaaaatgctcaatcggaaaattgaatccgaaatgaaa
tcccagtgggtgcaagaagccgttgaaaatctaagcggtgaagagattcgctccatgcaa
caagacggcccgaaagagtttaagaatagtgatgacgaatatcggttcttcgcccgccaa
ctggtgatgcgtggcttcaacgaaattcaacaagatattgtccgtaatcgcttccttaat
attcgcggacagtatgttagtttcttgcgtgaagtaccagctatttatgacctcgaagcc
gagggcattagtgctgatgactggcaggcagaagtcgatcattttattaccttatttaag
gaacgccaactaccaatggcagacgcaacgccatatctgcacttgtatgatttgatcact
ggtcgccatggtgaacgcgagatgcggtatgtcttcattgatgaaattcaagattacaca
ccatatcagctcgcctacctcaaggacagcttcccgcgggcgaagtttacgttgctaggc
gatctcaatcaggctattttcacaaaagacgattcgcggacgctgattaacgaaaccagc
aagctgtttgatccagaaaaaacccgcgtcgtgcagttaacccaaagttatcggtctacc
aaacaggtcaccgactttacgaaagcgattctcacatctggtcaaaaaatcgtggcgttc
aatcgccaaggaccattgccaaagttggtcgttcgtccagatgaagccgggttgatggcg
gccttgcaggatcaattgaaaattaacaatgaagcgaagcagacaactgcggtcattgcg
aaaacgctggaagccgcagaagccatttatgaacaaatgaaggcggctggcatcaaagta
actttgatcaagtctgaaaatcaacgactcgcggccggcgtcatcgttgttccaagcttt
ttggctaaggggctcgaattcgatgccgttgtgctttggcaaatcaatgcggccaattac
catgaagaggatgaacgtgagttgttatacacggtggcgtcccgggccatgcatcgacta
accatgctggctagtcctgatgtgacgccgttgttagacaaagtaccggctgacttgtac
gagcgggggtaa
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