Lacticaseibacillus paracasei subsp. paracasei: LBPC_2024
Help
Entry
LBPC_2024 CDS
T04768
Name
(GenBank) helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lpap
Lacticaseibacillus paracasei subsp. paracasei
Pathway
lpap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LBPC_2024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpap03400
]
LBPC_2024
Enzymes [BR:
lpap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LBPC_2024
DNA repair and recombination proteins [BR:
lpap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LBPC_2024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
SH3_13
PIF1
AAA_11
Viral_helicase1
PhoH
AAA_22
NAT10_TcmA_helicase
AAA_25
UvrD-helicase
AAA_16
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAN72320
LinkDB
All DBs
Position
complement(2124700..2127282)
Genome browser
AA seq
860 aa
AA seq
DB search
MANQEQVYENVDLQVIKLLFNSDNGDYKVYAVRILNPNPALKMTLTQEATITGDMGYYNR
RAIITADLVYDDAGSLRYNKPSYKLARLHFGLPKEPRRQWQLIDTLLVHQPTVRRRLHEH
FADDTPILTIFSTDQVKPNSVPGIGPATIKKIATAIRGKLEIAVLANHWGKALSSMTYEK
IWLAYKDANLAMQSIDANPYLLMSVAQLDFKKVDTFAKMRGIAANDPHRLTAGLQYIFRT
AVLTQGLTYITITWFRQQAATLLAVREADLKMFADPQEALQYGFLLNEQYGLVTSCDMFA
TEGSVARIIKVAQKTAEPLMAPDELDDALDQFLDRFHLTINDQQRAAFQNVNRHGLSVLN
GSAGTGKTWLTDLLVRFFNAQAKEKSVLLAPTGRAAKVLAKYTHEPAATIHAYLHLLPGE
ETGQFDADADWETFGDARLIVVDESSMLTTPLAYTVLKNVNFKKAHVLFVGDVFQLPPIG
PGNFLKDCLDDEQVAATTLTRVYRQDSQSGVLALANRIRERLALPFGPDDDRYVSGNVAL
YNQRNAGRVFDAGVKAYQDALVKSGQQIDAQLLIVNKNIGATGRLRFNAELQALVNPAKN
GEPEYISSYVDPVTNQKHHLRLNDRVMILKNDKHVPLVDPKTWQRRAVLGENGLQQTDDF
GTKRWRETIVANGDTGVVAHIDTKRHFVVVQIGQQYCYYSFGSVPRDLTLAYAITVHKAQ
GGQADTVIAIVNGADMMLNAQSFYTALTRTQQQFIFFGDFRVLLARTKIYPIDARHDLLG
SFLSGQLTVDTFSRYTFDQVLAWLDKRHAERLSTRPALEAEEVKPSEQPFAVRYAEQLDI
LDQIVDEVAQLPARKPARDV
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcaggaacaagtttatgaaaatgttgatctgcaagtgatcaagttgctgttt
aatagcgataacggtgattataaagtttacgccgtgcggattctgaatccgaatccggcg
cttaaaatgacgctcacccaagaggcaaccattaccggtgatatgggctactacaatcgc
cgagcgatcatcaccgctgatttggtttacgatgatgctggctcattgcgttataacaag
ccgtcttacaaattggcgcggttgcattttggcttgcccaaagaaccgcgccggcagtgg
cagctgattgacacgttactggtgcatcagccgacagttcggcgccgattgcatgaacat
tttgcggatgataccccgatcttgacaattttttcaaccgatcaggtaaaaccgaatagt
gtcccgggcattggtcccgccacaattaagaaaatcgctaccgccatccgcggcaaactg
gaaattgccgtgttggccaatcactggggcaaggcactaagctcaatgacttatgaaaaa
atttggttggcttataaagatgccaatttggccatgcaaagtattgatgccaatccgtac
ctgttgatgtcagttgcccagcttgatttcaagaaagtcgacacctttgctaaaatgcgt
ggcattgcagcgaatgatccgcatcggcttacggcaggattgcaatatatttttcgcacc
gctgtactcacgcaaggattgacctatatcaccattacgtggttccggcagcaagccgct
actttattggctgtacgcgaagccgatttgaaaatgtttgctgatccgcaagaagccttg
caatacggctttttacttaacgagcagtatggacttgtgacgagttgcgatatgtttgcc
acagaaggatcggtggcgcggattattaaagtcgctcaaaaaacagccgagccgttgatg
gctccggatgagctagatgatgctctcgatcagtttctcgatcggtttcatttaaccatt
aatgatcaacagcgcgccgcttttcaaaatgtgaaccgtcatggcttgagcgttttgaat
ggcagtgctggcaccggtaaaacttggttgaccgatttgctggttcggttttttaacgcc
caagcaaaagagaaaagtgtcttgcttgcaccaactggccgcgccgccaaagttttggca
aagtatacgcacgagccagctgctacgattcatgcttatctgcatctactgccaggtgaa
gaaaccggccagtttgacgcggatgccgactgggaaacctttggcgatgcgcgactcatt
gtggtggatgaaagctcaatgctgacaacgccgctagcctacacggttttgaagaacgtt
aatttcaaaaaggcgcatgtgctgtttgtcggtgatgttttccaactgccgcccatcggt
cccggcaactttttaaaagattgtctagacgatgaacaggtggcggcgacaacactgacg
cgcgtttatcggcaagatagccagtccggcgtgttagcactagctaatcgcattcgtgag
cggttagcgctgccttttggaccagacgatgatcgctatgtcagcggcaacgtggcgctg
tataaccaacgcaatgctggccgggtgtttgatgctggggtgaaggcgtatcaggatgcg
ctggtcaaaagtggtcagcagattgatgcgcaattgttgatcgtgaataaaaacatcggc
gcaactggccgcttgcgatttaatgctgagttgcaagcgttggtcaacccggctaaaaat
ggcgaaccggagtatatcagcagttacgtggacccggtcactaatcaaaaacatcacttg
cgcctcaatgatcgggtcatgattttgaaaaacgacaaacatgtcccgcttgttgatccg
aaaacatggcaacggcgtgcagtgctgggcgaaaatggcttgcaacagaccgatgatttt
ggcactaaacgttggcgtgagacaattgtggcaaacggcgacacaggggtggtagcccat
attgataccaaacgccattttgttgtggtccaaatcggccagcaatattgttactacagt
tttggcagcgtgccgcgcgatttgacgttggcttatgcgattacggtgcataaggcccaa
ggtgggcaggcagataccgttattgccattgtcaacggcgccgacatgatgctcaacgcc
caaagcttttatacggcgttgacgcgcacccagcagcaattcatcttttttggtgacttt
cgggtgctcttagcccgcaccaaaatctatcccatcgacgctcgccatgatttgcttggt
agttttctatccggccaactgacagtcgatacgttcagccgctatacctttgatcaggtc
ttggcttggctggataagcggcacgctgaacgcttatccacgcgacccgcgctggaagca
gaggaagtcaaaccaagcgagcaaccatttgccgttcgttatgcggaacaactggacatc
ttggatcagattgtcgatgaggttgctcaattgccggctagaaaacctgctcgggatgtt
tga
DBGET
integrated database retrieval system
