Lacticaseibacillus paracasei subsp. paracasei: LBPC_2194
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Entry
LBPC_2194 CDS
T04768
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lpap
Lacticaseibacillus paracasei subsp. paracasei
Pathway
lpap03030
DNA replication
lpap03430
Mismatch repair
lpap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBPC_2194
03430 Mismatch repair
LBPC_2194
03440 Homologous recombination
LBPC_2194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpap03032
]
LBPC_2194
03400 DNA repair and recombination proteins [BR:
lpap03400
]
LBPC_2194
Enzymes [BR:
lpap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBPC_2194
DNA replication proteins [BR:
lpap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBPC_2194
DNA repair and recombination proteins [BR:
lpap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBPC_2194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
AAA_5
RuvB_N
AAA_30
AAA_16
TIP49
AAA_19
Mg_chelatase
AAA_24
AAA_18
AAA_assoc_2
AAA_14
AAA_7
DUF815
PIF1
Rad17
nSTAND3
AAA_28
AAA_17
Cytidylate_kin
AAA_2
AAA_11
Sigma54_activat
RNA_helicase
SLFN-g3_helicase
DnaX_C
SKI
bpMoxR
Sigma54_activ_2
Hemerythrin
TsaE
Motif
Other DBs
NCBI-ProteinID:
BAN72490
LinkDB
All DBs
Position
complement(2307975..2309672)
Genome browser
AA seq
565 aa
AA seq
DB search
MSYQALYRVWRPQQFKDVIGQEAITKTLKNALITGQTSHAYLFTGPRGTGKTSVAKILAK
ALNCLHLEDGEPDNTCEICQAINNGSLTDVIEIDAASNNGVDEIRDIRDKAKYAPTQARV
KVYIIDEVHMLSSGAFNALLKTLEEPPAHVVFILATTEPHKIPATIISRTQRFDFRRITP
EDIVKRMRFILDDKQITYDDAALKVIAKAAEGGMRDALSILDQVLSFGDNHVTTEDALDV
TGGVTTAVLGKYLAAVLAKDHAQALKMIEDLLASGKDAGRLIEDLIEYLRDLLVNQQAPT
LLGDLEKSLLDDQFKILSENFKPEQIYHMIDVLNSTQQQLRMTNHPEIYLEVATVRLSET
TTPQVTAAPAQAENPQFEKLTAKVKQLSDQLKRVEANGGTIPPPTRTRKHVKAKANHVNR
KAIYPILGAATKQDLTNLKDVWPNLLGLLSITKRAMMKVSEPVAASPNGVIVSFDYDIYV
ERAMNDAALMTELESGLQKLTGKQPKIVLVQSDVWPTIRQDYIQELKAPENKEQKADTKP
QIPPVVSKLTELFGKDAPNVTIKND
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgagttatcaagcgttatatcgggtgtggcgcccgcagcaatttaaagatgtgattggc
caagaagccatcaccaagacgctgaaaaatgcgctgattactggccagacaagccacgcc
tatctttttaccggcccccgcggtaccggtaaaacatcggtcgccaagattctggcaaag
gcattgaactgtctacacttggaggatggtgagccagataatacttgtgaaatttgtcag
gctattaataatggcagtttgaccgatgttatcgaaattgatgctgcttctaacaacggc
gtggatgagattcgtgacattcgggacaaggcaaaatatgcgccaacacaagctcgcgtc
aaagtgtatatcatcgatgaagtgcatatgttatcgagcggagccttcaatgctctgctg
aaaacgctggaagaaccgccggcgcatgtggtgtttattttagccacgacggagccacat
aaaatcccagcaacgattatttcgcgaacacaacgatttgattttcgccggatcacgccg
gaagatatcgttaagcgaatgcgttttattttggatgataagcaaatcacatacgacgat
gctgcgttgaaagtgattgccaaagcagctgaaggcggcatgcgggatgccttatcgatt
cttgatcaagtgttgagttttggcgataatcacgtcacaacggaagatgcacttgatgtc
acaggcggtgtgactactgctgttttgggcaagtatttagccgcggtcctcgccaaggat
catgcgcaggcattgaaaatgatcgaggatttgttagcgtcaggtaaagatgctgggcgg
ttaatcgaagatctgattgaatacttgcgggatctgttggttaatcaacaagcaccgaca
ctcttgggtgatttagaaaaaagcttacttgatgatcaattcaaaattctgagcgagaac
ttcaagccagagcagatctaccacatgattgacgtgttgaatagcacgcagcaacaactg
cggatgaccaatcatccggaaatttatctagaagtggcaacggttcgattaagcgaaacg
acaacgccacaggttacggcagcaccagcacaggcagaaaatccgcaatttgaaaaattg
acggcaaaagtcaaacagctgagtgatcaactgaaacgggtcgaggcgaacggcggcacc
attccgccaccaaccagaacccggaaacatgtgaaggccaaagccaaccatgtcaatcgt
aaagctatttatccgattttaggtgccgcaaccaaacaggacctgaccaatttaaaggat
gtttggccgaatctgctgggtctgcttagtatcacgaaacgcgccatgatgaaagtcagt
gaaccggttgctgccagtcctaacggtgtgatcgtgagtttcgattatgatatctacgtt
gaacgcgccatgaatgatgccgcactgatgacggaattggaaagtggtctacaaaaatta
accggcaagcagccaaaaattgttttggttcaaagtgatgtctggccaaccattcgacaa
gattatattcaagaattgaaggcccctgaaaacaaggaacagaaagctgacactaaaccg
cagataccgccagttgttagcaaattaacagaactatttggtaaagatgcacctaacgta
acaatcaaaaatgactag
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