Limosilactobacillus panis: KZE55_00605
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Entry
KZE55_00605 CDS
T07939
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lpas
Limosilactobacillus panis
Brite
KEGG Orthology (KO) [BR:
lpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpas03400
]
KZE55_00605
Enzymes [BR:
lpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KZE55_00605
DNA repair and recombination proteins [BR:
lpas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KZE55_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF234
Motif
Other DBs
NCBI-ProteinID:
QZN93132
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All DBs
Position
113221..116973
Genome browser
AA seq
1250 aa
AA seq
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MGKLGFVLGTAAKDHQEVLVDQIADQLKTAPREDTFFYIVPNHIKFQTEIDVLSSLRARQ
GKGNTDRFASSRVQVLSFSRLAWFLLRDSPALKRARLSNIGLTMLVAKVVQEHANDLQLY
ASEAQQPGFIQKLTDQLTELANANISADDLTIILQQAQRDQQGSRAWLAKMHDVELIYHA
YEERVVGHFLGNNELYQQLSQYLAQEPASKHMHFFIDRFAQFTPGEQQVVNAMIVNGAST
TVSLVLDHGYPDQDHPDKRALPGVTDLFYPAAMQYHRLYEFAVQHPHEVTILPNVLFASR
VRVSPTLRQVDNFFADYIKRPLNLADGTQPTDPNDLQFITTANRRTELDRVATMIRQLVL
SGKYRYRDFLILSRRLDRYQTMIAPVFASHEIPIFNDHERRMDNHPLVTLLTALFNLPLY
GYRTTDIMQLLKTWLFAEYNPQTGDYQPLDQDAVFATENWCLKRAIDGRGTWEKADSVLW
QVSGSADSPTDNLQAQLTHVQGFVAHQVIAFLKELKDIKTGRELAGRLYQFLVDNGVTKR
LADWQKYQSDKNLDLARQPQQVWATFCQILDEYVQILGDTPVTADNLTTTLTNFSELLQA
GFAAAQYSQIPATMDQVMISETGIVQNQDRKIVFLIGSTDDVMPEIQPTEGLLTDDDKAI
LDDYLDDTTQYLPNGTKNQLQDERFLHYSGMLTGTQRLIMTAPAENSEGAPLTRSPYLDA
MAQYFKQPVQNFPLVTSTVGQADAHPYLSAPAATISKLVQVERQARNDARTAKRHYVLSP
SWQGVRQALVDLTARDRSAADARAQERGQKLAAHLRLVAAGFNYRNRVDDLDQQLAAALY
LRHSHGQNILYSSISQLQDYYVNPYEYFLKYGLRLQKRDQLTMSVDRIGTFFHKAMEWFV
SAVNQDVQLDFAQLASDPDRLNDLIKTALDVAKKDQSDLSILMASSFQAAFQYKQLTGIV
KTMLTVLCYQAKYTAARPLDTEIRFGRLGAAKKDDLRPLEYDLKPRNTHIYLRGRIDRVD
QLTQDQTDYLTVVDYKSGNRTFDLTAAYYGLSLQLLSYLNAIAANRDQLPQRLRTSRPDL
QLAGALYLHLSNPLIKAANFKDDADLTALRLQQHQYKGLLLNDPALLKQLDKNLAHQSLV
YPLKMNKDEAISAKKDALLVTPDQLTWLQNRNKQLIIDAGNDILAGRVALRPYRLLEGSK
WKTGLDYTDFQDIYQFDNMLDQQNYRLLSARLAEEEFKQFNEDDEKGGKQ
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
gtgggtaaacttggatttgttttagggacggccgctaaggaccaccaggaggtcttagtc
gaccagattgcggaccagttgaaaactgcaccacgggaggacacttttttctacattgtc
cccaaccacattaagtttcagacggaaattgacgttttgagcagcctgcgggcccggcaa
gggaaggggaacacggaccggttcgcttcttcccgggtccaggttctttcctttagccgg
ttggcctggttccttttgcgggacagcccggcgctgaagcgggctcgcctgtccaatatt
ggcctgacaatgctcgttgctaaggtcgtccaggagcatgccaacgacctccagctgtac
gccagtgaggcccagcagcccggcttcattcagaaactaacggaccagttgacggaactg
gccaatgccaacatttcagcggacgacctgaccataattctccagcaggcccaacgtgac
cagcaggggagtcgagcctggcttgccaagatgcacgacgtcgagctgatctaccacgcc
tatgaagagcgggtagtcggtcatttcctgggaaataatgaactgtaccagcagctatcc
cagtacctggcgcaggagccggcaagtaagcacatgcacttcttcatcgaccgctttgcc
cagttcactcccggtgagcagcaggtggtcaacgccatgatcgtcaacggggcttcgact
acagtttccctggtgcttgaccatggttatccggaccaggaccaccccgacaagcgggca
ctgccgggcgtcaccgacctcttttacccggcggcgatgcagtaccaccgcctttacgag
tttgcggtccagcaccctcatgaagtcacaatcctgccaaacgtcttatttgccagccgg
gtccgtgtcagtcccaccctccggcaggtcgataatttttttgctgactatattaaacgc
ccgttgaaccttgctgatgggacccaaccgacggacccaaatgatctgcaattcatcacg
acagctaaccggcgcacggaattggaccgggtagcgacgatgattcgccagctggtcctg
agcgggaagtaccgctaccgggacttcctaatcttgagtcggcgcctagacaggtatcag
acgatgattgccccggtatttgcgagccacgaaatccctatctttaacgaccacgagcgg
cggatggataaccaccccctcgtgacccttttgacggcgctctttaacctgcccctttat
ggctaccggacaaccgacatcatgcagcttttaaagacctggctctttgcggagtacaac
ccgcagacgggggactaccagcccctggaccaggacgccgtctttgcaaccgaaaattgg
tgcctgaagcgggcaatcgacgggcgcggtacctgggaaaaggcggattcagtcctctgg
caagttagtgggagtgcggattcgccaactgataacctccaagcccagctgacccacgtt
caaggctttgttgcccaccaggtgattgcctttttgaaagagctaaaggatatcaagacc
ggacgggagctcgctggtcgcctctatcagttcctggttgacaacggggtcaccaagcgc
ctcgctgactggcagaagtatcagagcgataagaacctcgacctggcccgccagccccag
caggtctgggccaccttttgccaaattcttgatgaatacgtccaaatcctcggcgacacg
cccgtcaccgcggataacctcacgacgaccttgactaactttagcgagctcctccaggcc
ggctttgctgctgcccagtactcgcagattccggccacgatggaccaggtgatgatttcg
gaaacgggaattgtccagaaccaggaccgcaagattgtcttcctgatcgggtcgacggat
gacgttatgccggagattcagccgacagagggtcttttgaccgatgacgacaaggccatt
ttggatgactacctggacgatacgacccaatacctaccgaacgggaccaaaaaccagctg
caagacgaacgcttcctccattactcggggatgctgacggggacccagcggctaatcatg
accgcaccagccgaaaacagcgagggggccccattgacccggtcgccatacctagacgcc
atggcccagtacttcaaacaacccgttcagaactttccactggtaacgagcactgtcggc
caagcggacgcccacccgtacttgagtgccccggccgcgacgatcagcaaactagtccag
gtcgaacgacaggcccgcaacgacgcccggacggctaaacgacactatgttcttagccct
agttggcagggggtccggcaggcccttgttgacctgacggccagggaccgcagtgctgcc
gatgcccgggcccaggaacggggacaaaagttggcggcccacctccgccttgttgcggcc
ggctttaactaccgcaaccgggtcgatgaccttgatcaacaactggccgcggccctctac
ctccggcacagccacggtcaaaacatcctctactcatcgatttctcagctacaggattac
tacgtcaacccgtacgagtactttctcaagtacggcctgcgcctgcagaaacgcgaccag
ctgaccatgtccgtggaccggattgggactttcttccacaaggcaatggagtggtttgtc
agtgccgttaaccaggacgtccagcttgactttgcccaactggccagtgatccggaccga
ttaaatgacctgatcaagacggccctggacgtggccaagaaggaccagtcggacctgtcg
attttgatggccagctcctttcaggcggctttccagtacaagcagctcaccgggatcgtg
aagacgatgctgacggtcctgtgctaccaggccaagtacacggccgcccgtccactggat
accgaaattcgcttcgggcgcttgggagctgctaagaaggacgacttacggccgctagaa
tacgacctgaaaccgcgtaacactcatatttaccttcggggacgaatcgaccgggtcgac
caactgactcaggaccagaccgactatttaaccgtggtggattacaagtctggtaaccgg
acctttgacctgaccgcggcgtactacggcctttccctccagctgctgtcctatctaaac
gccattgcggctaaccgggaccagctgcctcagcgcctccggacgtctcgtcctgacctc
cagctcgccggggccctctaccttcaccttagcaaccccctgatcaaggcggccaatttt
aaggatgacgcggacctgaccgccctgcggcttcagcagcaccagtacaagggcctcctc
ttaaatgacccggccctgttaaagcagctggacaagaacctggcccaccagtccctggtt
tacccgctcaagatgaataaggacgaggctatctcagcgaagaaggacgccctcttggtc
acgcctgaccagctgacctggctgcaaaaccgtaacaagcaactaatcatcgatgccggg
aatgatatcctggctgggcgggtcgccctgcggccctaccgcctcctagaagggagcaag
tggaagaccggcctggactacactgacttccaggacatttaccagtttgataacatgctc
gaccagcaaaactaccggctgttgagtgcccggctggcggaagaggagtttaagcagttt
aacgaggacgatgaaaagggaggaaaacagtaa
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