Limosilactobacillus panis: KZE55_03600
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Entry
KZE55_03600 CDS
T07939
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lpas
Limosilactobacillus panis
Pathway
lpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KZE55_03600 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpas03019
]
KZE55_03600 (rny)
Messenger RNA biogenesis [BR:
lpas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KZE55_03600 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Activator-TraM
ATP-synt_B
KH_2
ArsP_2
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
QZN93642
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Position
774311..775864
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AA seq
517 aa
AA seq
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MQLLIFAALSMVVGLIIGYIVRKASYEKKLAAAHQTAEEIISTAKTKAETAKKESILEAK
DESHRYRESVENELKQRRNEIQRQEDRLLQRETSLDHKDIALEKRETALGNREHKVDQLT
EKLHRQQQAADDLVDQRQVELEKVAQMSHDDAKQQLLDEMKDKLKTEREVMIRDSEQQAE
MTADRNAKKLIVEAIQRSAADVVSEATVSVVNLPNDDMKGRIIGREGRNIRTLETLTGID
LIIDDTPEAVVLSGFDPVRREIAKIALEKLIQDGRIHPARIEEAVEKAQKQMDSQLRETG
EQALFDLGIHSMHPDLIKTVGRMKYRTSYGQNVLDHSIEVAKLAGIMASELGEDAALAKR
AGLLHDIGKAIDHEVDGSHVELGVELARKYKENKVVINTIASHHGDVPAGSVIAVLVQAA
DAISGARPGARSESLEQYIQRLKKLEGIANSYDGVDHSFAIQAGRELRVIVKPKKISDLQ
ATTLAHDIKQKIEQQLEYPGHIKVTVIREVRAIDYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgcagttattaattttcgccgcgctttctatggttgtcggtcttattattggctatatt
gttcgtaaagccagttatgaaaagaagctggcggcagcacaccagactgctgaagaaatt
atttctacagccaagacgaaagcggaaacggcgaaaaaggaatcaatcctggaagcaaag
gacgagagtcaccgctaccgtgaaagcgttgaaaatgaactaaagcaacgacggaacgaa
atccaacggcaagaagaccgcttgctccagcgtgagaccagccttgaccataaggatatc
gccttggaaaagcgggagaccgcacttggcaaccgagaacacaaggttgaccagttgacg
gaaaaacttcaccgtcaacaacaggccgccgacgatttagtcgaccaacggcaggtggaa
ttggaaaaagttgcgcaaatgtctcacgacgatgccaagcaacaactcttggatgagatg
aaggataagttgaagactgaacgtgaggtcatgattagggacagtgaacagcaggcagag
atgactgctgaccggaacgctaagaaactgattgtggaagcaattcagcggagcgctgcg
gatgttgtgtctgaggcgacagtttcagtcgtcaacttgccaaatgatgacatgaagggc
cggataatcggtcgggaaggccggaacatccggactctagaaaccttaaccgggattgac
ttgatcattgatgatactccggaagcagtggtcctcagtggttttgatcctgtccggcgt
gaaattgccaagattgcattggaaaagctaattcaggatggccggattcatccagcacgg
attgaagaggcggttgaaaaggcgcaaaagcagatggatagccagcttcgggagactggt
gagcaggccctctttgacctcggaatccattcgatgcatccggacctgattaaaacggtt
ggccggatgaagtaccggaccagttacggtcagaatgtcctggaccactcgattgaagtt
gctaaacttgcgggaattatggcaagtgagcttggtgaggatgctgcccttgccaaacgg
gccggactccttcacgatattggaaaagcaattgaccacgaagtcgatggctcccacgtt
gagttgggggtcgagttagcccggaagtataaggaaaacaaggttgtaatcaatacgatt
gcatcccaccacggtgatgttccagcgggttcagtaattgcggtccttgttcaagccgcc
gatgctatttctggtgcccggccaggagcacggagcgagtccctggagcaatatatccag
cggttgaagaagctggaaggcatagctaatagttatgacggtgtcgaccatagttttgca
attcaagctggtcgtgaattacgggtaattgttaagcctaagaaaatctcggaccttcag
gcaacgactttggcccacgatattaagcagaaaattgaacagcaactagaatatcctggt
cacatcaaggtgaccgttattcgtgaagtacgggcaattgattatgctaaatag
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