Limosilactobacillus panis: KZE55_04120
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Entry
KZE55_04120 CDS
T07939
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lpas
Limosilactobacillus panis
Pathway
lpas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KZE55_04120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpas03400
]
KZE55_04120
Enzymes [BR:
lpas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KZE55_04120
DNA repair and recombination proteins [BR:
lpas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KZE55_04120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
AAA
nSTAND3
UvrD-helicase
AAA_7
AAA_29
AAA_28
AAA_16
RsgA_GTPase
PIF1
DUF815
NPHP3_N
TsaE
DEAD
HHH_5
Mg_chelatase
AAA_25
NTPase_1
NACHT
ABC_tran
AAA_23
CPT
AAA_17
Zeta_toxin
Ploopntkinase3
HTH_IclR
AAA_18
NB-ARC
AAA_14
cobW
HHH
Rad17
Motif
Other DBs
NCBI-ProteinID:
QZN93720
LinkDB
All DBs
Position
858590..860983
Genome browser
AA seq
797 aa
AA seq
DB search
MATEMDLFKTPQEPSFFVGQVQSEIFTSPDSFYKVLAVSVEDANFDWDENEITVTGSFGD
LSDDQTYRFEGQLVEHPRYGWQFQAKSYHVNRPTSRGGLVEFLASKQFPGVGQKTAEKVV
DALGTNAIDKINADPHVLDPLNLRKAVRDSLVENLQANQGLDQVIIGLNDFGFGSNLISS
IVDRYGEDALQVIKENPYQLAADIDGISFKRADQVAAKLGIAGNDPRRINAAVVQSLDDL
TMATGDTYTSIKPLLANSLQLLNGDGRSADSNIVADQIVAMEKKHQINYEDDHLYPTSLY
RAEYQIADHLQRLMGTGEERIADETIMATLKRTEEETGIKYDRVQVQAVETALNNKVMLL
TGGPGTGKTTIIRAIVECYAKVHQLSLEVNDYKGKVFPILLAAPTGRAAKRMSDTTDLPA
STIHRLLGLNGREMPTDISARDLKGSLLIVDEMSMVDTLLFKTLIQAVPTAMHVVLVGDK
DQLPSVGPGQVFHDLLSFKELPKIELVDIHRQAADSTIIPLAHAIKEGHLPADLMAKKAD
RSFIPCRAGQVPDVVHQIIEKSEERGYSSADVQILAPMYRGMAGVDNLNELAQDVYNPAS
QSKQSVEYRGQTFRVGDKVLQLVNSPENNVFNGDIGKIVAIEGTEKGQKNPNMTIDFDGN
EVKYSRMEWNQLQLAYAISIHKSQGSQFKMVLLPVVRQFSRMLQRNLIYTAITRAADKLI
MMGEAQAMAMAVRNVGTNRQTTLLQRLNEKWHKQPTAGDVQSTSPTTSGETVLTPALIEQ
GTIDPLIGMDGLRPSDL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagaaatggatttatttaagacgccacaggagccgtctttttttgttggtcag
gttcaatccgagatttttactagcccggattctttttataaagtgttggcggtctctgtg
gaagacgctaactttgattgggacgaaaacgagatcacggtaacggggagcttcggtgac
ctgagtgatgaccagacttatcgttttgagggccaacttgttgaacatccccgttatggt
tggcagtttcaggctaagtcttaccacgttaaccggccgaccagtcgagggggcctggtg
gaatttctggccagcaagcagttcccgggtgtcggacaaaagacggccgaaaaagtggtc
gacgccctgggtactaacgccattgacaagattaacgctgatccccatgtcttagatccc
ctaaaccttcgcaaggctgtccgtgattcactggttgaaaacctccaggcaaaccagggg
cttgaccaagtaataattggccttaatgactttggcttcggaagcaacctgatttcttct
attgtcgatcgctatggtgaggatgccctccaggtgattaaggagaatccctaccagctt
gcggcggatattgatggaatcagcttcaagcgggctgaccaagttgctgccaaattaggg
attgccggcaacgacccccgccgaatcaacgcagcggttgtccagtccttagacgacctc
acgatggccacgggagacacttacaccagtatcaagccccttctcgctaacagccttcag
ctcctcaatggagatggtcggtcggcggacagtaatatcgttgctgatcagattgttgca
atggagaaaaagcaccaaattaactatgaggatgaccacctgtacccgactagtctctac
cgggctgaataccagattgctgatcacttacagcgcttgatgggcacgggtgaagaacgg
attgccgatgagacaatcatggcaacgctgaaacggaccgaggaggaaacgggcatcaaa
tatgaccgggtccaggtccaggccgtggagaccgccctaaacaataaggtcatgttgttg
accggaggcccaggtacaggaaagacgaccattatccgggcaatcgttgaatgctatgcc
aaggttcaccaactgtctttggaggtcaatgattacaagggaaaggtctttcccatcctt
cttgccgcaccgactggccgtgctgctaagcggatgagtgatactaccgacctgccggca
agtacaattcaccggttgctgggattgaatggtcgggaaatgccaacggatatcagtgcc
cgtgatttgaagggttccttgctgattgttgacgagatgtcgatggtggacaccctcctg
tttaaaacgttaattcaagcggttccaaccgcgatgcacgttgtcctagtgggtgataag
gaccagctaccgtcagtgggcccgggacaggtattccatgacctcctgtcctttaaggag
ttacccaagattgagctggtcgatattcaccgccaagcggccgattcgacaatcattcca
cttgctcacgcaattaaggaaggacacttacccgctgatttgatggccaagaaggcggac
cggtccttcattccctgccgtgcgggtcaggttccggacgtcgttcatcagattattgaa
aagagtgaggaacggggctattcatctgcagatgtgcagatcttggcaccaatgtatcgg
gggatggctggtgtggataacttaaatgagcttgctcaggatgtctataatcccgctagt
caatctaaacaatcggttgagtaccgggggcagaccttccgggttggtgacaaggtcttg
caactggtcaatagtccagagaacaatgtttttaacggggatattggtaagattgttgcc
attgaaggcacggaaaaggggcaaaagaacccgaatatgacgattgactttgacgggaac
gaggttaaatattcccggatggaatggaaccagctacagttagcttacgcaatttcaatt
cataagtcgcaggggagccagtttaagatggttctgttaccggtggtgcgtcagttcagc
cggatgttacagcgaaacctgatttacaccgcgattacacgggcggctgataagctgatc
atgatgggtgaggcccaagcaatggcaatggcggtccgcaatgttggtactaatcgccaa
acgaccctgctgcaacggttaaatgaaaagtggcataaacagccaacggcaggggatgtt
caatcaacttcaccaacgactagcggagaaacggtcttaacaccggcactaattgagcaa
ggcacgattgacccgctgattggcatggatgggctccgtccgtctgacctttaa
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