Limosilactobacillus panis: KZE55_07805
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Entry
KZE55_07805 CDS
T07939
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lpas
Limosilactobacillus panis
Pathway
lpas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KZE55_07805 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpas03021
]
KZE55_07805 (rpoC)
03400 DNA repair and recombination proteins [BR:
lpas03400
]
KZE55_07805 (rpoC)
Enzymes [BR:
lpas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KZE55_07805 (rpoC)
Transcription machinery [BR:
lpas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KZE55_07805 (rpoC)
DNA repair and recombination proteins [BR:
lpas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KZE55_07805 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QZN92681
LinkDB
All DBs
Position
complement(1604845..1608480)
Genome browser
AA seq
1211 aa
AA seq
DB search
MIDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKQGLFDERIFGPTKDYEC
ACGKYKRVRYKGRVCDRCGVEVTSSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEIIYFASYVVLDPGDTPLEKKQLLSEAEYRDKKAEFGDRFTAEMGAAAIKKLLA
DVDLDKEATELKEELKEATGQKRTRAIRRLDILEAFIKSGNKPEWMVLDVIPVMPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLKLQAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHLLKGKQGRFRQNLLGKRVDYSGRSVIDVGPSLKMNQMGLPVP
MALELFKPFIMHELVKRGLSANVKAAKRKIDRRDDDVFDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPILVSGKSMRLHPLVCTAYNADFDGDQMAIHVPLSDEAQAEARLLMLAAHHIL
SPRDGEPIVSPSQDMVIGNYYMTTEDKGREGEGMIFKDTDEAEMAYKNGYVSLQTRVGVQ
VSSFPDKPFTDEQRGRIMVTSVGKLLFNRIMPKDFAYINEPTDANIHEGVDDKFFLEPGQ
DIHEYLENAPLVPPFKKGFLSDLIAEVYKQYKVTKTSQFLDRIKDLGYYESTISGLTTAM
SDIHDLPEKPEIIKKARKQVALITKQFRRGLITDDERYERVIGAWNDAKDEVQNKLIEHM
DIHNPINMMSDSGARGNISNFTQLAGMRGLMASPNGKIMELPVLSNFYEGLSVLEMFLSS
HGARKGMTDTALKTANSGYLTRRLVDVAQDVVVREKDCGTDRGLEVTAITNGNEMIEPLY
DRIMGRYTMKSVFDPKTGEKIVGKNVLIDEDMAQKIVDAGVKKVTIRSAFTCNTEHGVCE
RCYGRNAATGDRVEAGEAVGTVAAQSIGEPGTQLTLRNFHTGGVAGNDDITQGLPRVQEI
VEARNPKGRATITEVTGEVVSIEENPAERTKDVTVKGETDTRTYTLPITARMRVSEGDFI
HRGTALNEGSIDPKELIQVRDVLSTETYLLAQVQGVYRMQGIDLLDKHVEIMIRQMMRKV
RVMDPGDTDLLPGQLMDIGQFREANKPTLYAGGIPATARPVILGITKAALETNSFLSAAS
FQETTRVLTDAAIRGKNDPLVGLKENVIIGKIIPAGTGMSTYRHIKPKEVSVAAYSIKDL
EAKMKEEDKQN
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtcaataaatttgaaagcatgcagatcggtctggcatcaccagataagatc
cgtagttggtcatacggtgaagtaaagaagccggaaaccatcaactaccggactttgaag
ccagaaaagcaaggtctgtttgatgaacgaatctttggcccaactaaggactacgagtgt
gcctgtggtaagtacaagcgggttcgttacaaaggtcgggtttgtgaccgttgtggggtt
gaagttaccagctcaaaggttcgtcgtgaacggatgggccacattgagttagcggcccca
gtatcacacatctggtacttcaaggggattccaagtcggatgggcttggtcctggacatg
agtccccgttccctagaagaaattatctactttgcttcctacgttgttcttgatccgggt
gacaccccactggagaagaagcaactgctttccgaagccgaataccgtgataagaaggct
gaatttggtgaccgtttcactgctgaaatgggtgcggcagccatcaagaagctgcttgct
gacgtggacctggacaaggaagcaaccgaattaaaggaagaattaaaggaagccactggt
caaaagcggacccgggcaattcggcggttggacatcctggaagccttcatcaagtctggt
aataagccagaatggatggttctagacgttatcccagtaatgccacctgacttacggcca
atggttcaactggaaggtggccgctttgctacctctgacttgaacgacctgtaccggcgg
gttatcaaccggaataaccggttgaagcgcctgttgaagctacaagcaccaggaatcatc
gttcaaaacgaaaagcggatgctgcaagaagccgttgatgcactgatcgataacggccgt
cgtggtcgtccggtagccggtcctggtaaccgtccactgaaatctctgtcacacctgctg
aagggtaagcaagggcggttccgtcaaaacctgcttggtaagcgggttgactactccggt
cgttccgttatcgatgttggtccatccctgaagatgaaccaaatggggctgccagttcca
atggccctggaactgttcaagccatttatcatgcacgaactggttaagcgggggctttct
gccaacgttaaggccgctaagcggaagattgaccgtcgtgatgacgatgtctttgatgta
ttggaagacgttatcaaggaacaccctgttctattgaaccgggcacctaccttgcaccgg
ttagggattcaggcctttgaaccaatcctggtttccggtaagtccatgcggttacaccca
ctggtatgtaccgcctacaacgccgactttgatggtgaccagatggccatccacgttcca
ttgtccgatgaagcgcaagcggaagcacgactgctgatgctggccgctcaccacattttg
agtcctcgtgacggggaaccaattgtttcaccatcacaggatatggttatcggtaactac
tacatgaccactgaagataagggtcgtgaaggagaagggatgatcttcaaggacaccgat
gaagctgaaatggcttacaagaatggctatgtttcattgcaaacccgggttggggttcaa
gtatcctccttcccagataagccgttcaccgatgaacaacggggccggatcatggtaact
tccgttggtaaactcctcttcaaccggatcatgccaaaggactttgcctacattaacgaa
ccaaccgacgctaacattcatgaaggggttgacgacaagttcttcctggaacctggccaa
gacattcacgaatacttagaaaacgccccactggttccaccattcaagaagggcttcctg
tccgatctgattgctgaagtttacaagcagtacaaggttactaagacttctcaattcctg
gaccggattaaggaccttggttactacgaatccacaatctccggtttaacaacggcgatg
tccgatattcatgacctgcctgaaaagcccgaaattatcaagaaggcccgtaagcaagtg
gccctgattaccaagcaattccgtcgtggtctgattacggatgacgaacggtacgaacga
gttatcggtgcttggaacgacgctaaggatgaagtgcaaaacaagctgattgagcacatg
gacatccacaacccaatcaacatgatgtctgactccggtgcgcgtggtaacatttctaac
tttacccagctagccgggatgcgtggtttgatggcctcaccaaacggtaagatcatggaa
ctgccggttctgtcaaacttctacgaagggctgtccgttctggaaatgttcctttcctca
cacggtgctcgtaaagggatgactgataccgccttgaagaccgccaactcaggttacctg
acccggcggctggttgatgttgcccaagatgtggttgttcgtgaaaaggactgtggtact
gaccgtggcctggaagttaccgccattactaacgggaatgaaatgatcgaaccactgtat
gaccggattatgggtcgttacacgatgaagtccgtctttgatccaaagactggtgaaaag
attgttggcaagaacgtgctgattgacgaagacatggcccaaaagattgttgatgccggt
gttaagaaggttaccatccgttccgccttcacttgcaacactgaacacggtgtttgtgaa
cggtgctatggtcggaacgccgctacgggtgaccgagtagaagccggtgaagctgttggg
actgttgccgctcaatcaattggtgaacctggtacccagctgaccttgcggaacttccac
actggtggtgttgctggtaacgacgatatcacccaaggtcttcctcgtgtgcaagaaatt
gtggaagcacgtaaccctaaagggcgggcaaccatcaccgaggttactggtgaggttgtt
tcaattgaagaaaacccggcagaacggactaaagacgttactgtgaagggcgaaactgac
acgcggacttataccctgccaatcacggcacggatgcgggtttcagaaggtgattttatc
caccggggaaccgcactgaacgaagggtcaattgatcctaaggaattaatccaggttcgg
gacgttctttcaacggaaacttacctgttggcccaagttcagggtgtttaccggatgcag
ggtatcgacctgctggataagcacgttgaaatcatgattcgtcagatgatgcggaaggtc
cgggtcatggatccaggtgatactgaccttcttcctggtcaactgatggatattggtcaa
ttccgtgaggctaacaagccaacgctttatgctggtggtattccagcgacggcccggcca
gttatccttgggattaccaaggccgctctggaaactaacagtttcttgtcggcagcttca
ttccaggaaaccactcgtgtattgaccgatgctgctatccgcggtaagaatgacccactt
gttggtttgaaggaaaatgttatcattggtaagattattccagctggtactgggatgagt
acttaccggcacattaagccgaaggaagttagtgttgctgcatactccatcaaggattta
gaagccaagatgaaggaagaagacaagcaaaactag
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