Lacipirellula parvula: PLANPX_0078
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Entry
PLANPX_0078 CDS
T06590
Name
(GenBank) hypothetical protein
KO
K24073
RNA polymerase sigma factor CnrH
Organism
lpav
Lacipirellula parvula
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpav03021
]
PLANPX_0078
Transcription machinery [BR:
lpav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PLANPX_0078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_30
HTH_23
EAD9
Frankia_peptide
Motif
Other DBs
NCBI-ProteinID:
BBO30466
UniProt:
A0A5K7X829
LinkDB
All DBs
Position
97991..98524
Genome browser
AA seq
177 aa
AA seq
DB search
MDAKGVFEILVREHAGMLRVYLRSAVADQAAVDDLFQETMLTAWRLIDRFDSSRPFGPWL
RGIAAKLVLAWRRKHATDPRLCDAAALEQLDVRMSEVQRLPGDTLDEKLDALRRCVAALP
EQYQATLDGRFREQLSPPEIAATLQLNLETVKKRLQRARALLLECMLGKLAALEAEG
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgaagggcgtattcgagattctggttcgcgagcatgctggcatgctccgcgtc
tatttgcgatcggcggtggccgatcaggcggcggtcgacgatttgtttcaggagacgatg
ctgaccgcgtggcggctgatcgatcgctttgattcgagccgccccttcggcccctggctg
cgcggaattgcggcgaagctggtgctcgcctggcggcggaagcacgcgaccgatccgcga
ctgtgcgacgccgcggcactcgagcaactcgatgtgcggatgagcgaagtgcagcgtctg
ccgggcgacacgctcgatgaaaagctcgacgcgctgcggcggtgcgtcgccgcgctgcct
gaacagtaccaggcgacgctcgacgggcgctttcgcgaacagctttcgccgccggagatc
gccgcaacgctgcagctcaacctggagacggtgaagaagcgtttgcagcgagcgcgagcg
ctgctgctggagtgcatgctcggcaagctggcggcgctggaggcggaaggatga
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