Lacipirellula parvula: PLANPX_0533
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Entry
PLANPX_0533 CDS
T06590
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PLANPX_0533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_0533
Enzymes [BR:
lpav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PLANPX_0533
DNA repair and recombination proteins [BR:
lpav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PLANPX_0533
Prokaryotic type
PLANPX_0533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
NUDIX
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
BBO30921
UniProt:
A0A5K7X840
LinkDB
All DBs
Position
complement(618574..619686)
Genome browser
AA seq
370 aa
AA seq
DB search
MATDCTAETLKDPKERQSLRRRLLAWFGKHKRDMPWRRTRDPYQIWLSEIMLQQTTVAMA
GPKFTVFVAAFPTVHDLAAADEQQVLRMWEGLGYYRRARGLHAAAKVIVAEHDGQLPRDV
KSLMALPGVGRYTAGAVASFAYDVSAPIVETNTQRVLARLTGYRDEVVGGAGQRHIWNAA
EALLPTTGAGTYNLALMELGALVCKPSDPRCDECPVTAHCAAFAGGLQNEIPKLAAKVKV
TAVREGTVVVRKSGRVLLRQRAKGERWEGMWDFPRFALDGEGPLFVRRELVDNVREQTGV
DIEPGPLLTTIKHGVTRYRITLECYEARATGGRVKSTDESSVRWTPLAELGDLPLSVTAR
KIATLITKQG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggactgcaccgccgagacgctgaaggatcccaaagaacgccaatcgctccgc
cgtcggctgctcgcttggttcgggaagcacaaacgcgacatgccgtggcggcggacgcgg
gatccgtatcagatctggctcagcgagatcatgctgcagcagacgaccgtcgcgatggcg
ggcccgaagttcacggtgttcgtcgcggcgttccccaccgtgcacgatttggccgctgcc
gacgagcagcaggtcctccgcatgtgggaaggcctcggctactatcgccgcgctcgcggg
ttgcatgcggcggcgaaagtgatcgtcgccgagcacgacggccagttgccgcgcgacgtg
aagtcgctgatggcgcttcccggcgtcggccggtacaccgcgggggccgtcgcctcgttc
gcgtacgacgtgtcggcgccgatcgtggaaacgaatacgcagcgggtccttgcccgcctc
accggctatcgcgacgaagtcgtcggcggagcagggcagcggcatatttggaacgccgcc
gaagcgctgctgccgaccaccggcgccggcacgtacaacctcgcgctgatggaactcggc
gcgctcgtttgcaaaccctccgacccgcgttgcgacgagtgccccgtcactgcccactgc
gccgcgttcgccggtgggctgcagaacgagatcccgaagctcgccgccaaagtaaaagtg
accgcggtccgcgaagggaccgtcgtcgtccgtaaatcgggccgcgtgctactgcgacag
cgagccaagggggaacgctgggaggggatgtgggacttcccgcggttcgccctcgacggc
gaaggcccgctgttcgtccgccgcgaactggtcgacaacgtccgcgaacaaacgggcgtc
gacatcgagccggggccgctcctcacgacaatcaaacacggcgtcacacgctaccgcatc
acgctcgaatgctacgaagcccgcgcaactggcggccgcgtgaagtcgacggacgagagc
tcggtgcgctggacgccgctcgcagaacttggcgatctaccgctgagcgtgactgctcgc
aaaatcgcgacgcttataactaagcagggttga
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