Lacipirellula parvula: PLANPX_0639
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Entry
PLANPX_0639 CDS
T06590
Name
(GenBank) G/U mismatch-specific uracil DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PLANPX_0639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_0639
Enzymes [BR:
lpav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
PLANPX_0639
DNA repair and recombination proteins [BR:
lpav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PLANPX_0639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
BBO31027
UniProt:
A0A5K7X5D5
LinkDB
All DBs
Position
complement(734613..735200)
Genome browser
AA seq
195 aa
AA seq
DB search
MKRKAQEPWKPTKAQLAAAQNKRVPDLLAKDLIVLFAGINPGLYTAAIGRHFGRPGNRFW
PALYGGGFTPRLFSPFESDSLLDLHLGITNVVSRATARADELTNDELRAGGKRLAAKVKR
WQPTVVAFVGIGPYRIVSGVKDASVGIQKDLFGGSHAWVLPNPSGLNAHYQPAALAKLFG
ELRVWAVAEHRRRKK
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaaagctcaagaaccctggaagcccacgaaggcccaactcgccgccgcgcag
aacaagcgcgtccccgacctgctcgcgaaggatctcatcgtcctcttcgcggggatcaat
cccgggctctacaccgccgcgatcggccgccacttcggccggcccggcaatcgcttttgg
cccgcgctctacggcggcggttttacgccacgactcttctcgccgtttgaaagcgactcg
ctcctcgacctccacctcggcatcaccaacgtcgtctcgcgcgccaccgctcgcgccgac
gaactcacgaacgacgaactccgcgccggcggcaagcgactcgcagcgaaagtcaaacgc
tggcaaccaaccgtcgtcgccttcgtcggcatcggcccgtaccgcatcgtctccggcgtg
aaggatgcgagcgtcggcatacaaaaagacctcttcggcggcagccacgcgtgggtgctg
ccgaacccgagcggactcaatgcgcactatcaaccggcggcgttggcgaagctatttggc
gagttgcgagtatgggccgtagctgagcatcgccggcggaagaagtga
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