Lacipirellula parvula: PLANPX_0930
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Entry
PLANPX_0930 CDS
T06590
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lpav
Lacipirellula parvula
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_0930
Enzymes [BR:
lpav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PLANPX_0930
DNA repair and recombination proteins [BR:
lpav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PLANPX_0930
Prokaryotic type
PLANPX_0930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBO31318
UniProt:
A0A5K7X3X2
LinkDB
All DBs
Position
1101716..1103179
Genome browser
AA seq
487 aa
AA seq
DB search
MTKPLTIVWFRQDLRIGDQPALRRAVDRGGVIPAYIWAPDEEGDWPLGGASRWWLHHSLA
SLDEQLRQRGSRLIVRRGPTQQTLDELLEQTGATAVYWNRRYEPAAIERDKQVKAALVSR
GVQAESFSGSLLHEPWTITTKQGAPYQVFTPFWKACLGAAVKHETLAAPREVAGPSKWPA
TLKLEELELLPTLAWDAGIAEAWEPGALAAERRLQEFVGEAIGRYQEDRDRTDIDSSSRL
SPHLHFGEISPRQIWLAVEKALEAFKAKSTSGASKTRQSAEVFLKEVGWREFAYHLLYYF
PQTPGEPLREQFRGFPWRRSQKDLRAWQRGRTGFPIVDAAMRELWTTGFMPNRTRMIVAS
FLTKDLRLTWLRGAEWFWDTLVDADLANNTLGWQWTAGCGADAAPYFRVFNPTMQAEKAD
PDGEYIRRWVPELAKLPTKWLREPWTAPEEELVAAGVELGKTYPRPMVDHHEARDAALAA
YERVKKS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaccgttgacgatcgtctggtttcgccaagatctccgcatcggcgatcagcca
gctctgcgccgcgcggtcgatcgtggcggcgtgatcccagcctacatctgggcgcccgac
gaggagggcgactggccgctcggcggggcgtcgcggtggtggctgcaccattcgctcgcc
agcctcgacgagcaactgcggcagcgcggttcgcggctgatcgtccggcgcggtccgacg
caacagacgctcgacgaacttctcgaacaaacgggcgccaccgccgtctattggaatcgc
cgctacgaacccgcggcgatcgagcgcgacaagcaagtgaaggcggcgctcgtatcgcgc
ggagtacaggccgagagttttagcggctcgctgctgcacgagccgtggacgatcaccacg
aagcagggggcgccctaccaagtcttcacgccgttttggaaggcgtgcctcggcgccgcc
gtaaaacatgagacgcttgccgcgccacgcgaagttgcgggcccgtcgaagtggccggcg
acgctcaagctcgaagagttggagctgttgccgacgctcgcctgggacgcggggatcgcc
gaagcgtgggagccgggcgccctggcggcggaacggcggctccaagaattcgtcggcgag
gcgatcggccgctaccaagaggatcgcgatcggaccgatatcgacagctcgtcgcggctc
tcacctcatcttcactttggcgagatcagcccgcggcagatttggttggcggttgagaag
gcacttgaggcattcaaagccaagtcgacgagcggcgcctcgaagacgcggcaaagcgcg
gaagtcttcctgaaagaggtcggctggcgggagttcgcgtaccacttgctctactacttc
ccgcagacgccgggcgagccgctccgcgaacagttccgcggcttcccttggcggcggagc
cagaaagacctgcgcgcgtggcagcgcgggcgaacggggttccccatcgtcgacgccgcg
atgcgcgagctgtggacgaccggcttcatgccgaaccgcacgcggatgatcgtcgcgtcg
ttcctcacgaaggacctgcggctcacttggctccgcggcgccgagtggttttgggacacg
ctcgtcgacgccgaccttgcgaacaacacgctcggctggcagtggaccgccggctgcggc
gccgacgcggcgccttactttcgtgtgttcaacccgacgatgcaggcggagaaggccgac
cccgacggcgagtacatacgccggtgggtgcctgagctcgccaagctgccgacgaagtgg
ctccgcgagccgtggaccgcgccggaggaagagctggtggcggcgggcgttgagttgggg
aagacttatccgcggccgatggttgatcaccatgaagctcgcgatgcggcgctggctgct
tacgagcgggtaaagaagtcgtaa
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