Lacipirellula parvula: PLANPX_1296
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Entry
PLANPX_1296 CDS
T06590
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lpav
Lacipirellula parvula
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpav03016
]
PLANPX_1296
Enzymes [BR:
lpav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PLANPX_1296
Transfer RNA biogenesis [BR:
lpav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PLANPX_1296
Prokaryotic type
PLANPX_1296
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BBO31684
UniProt:
A0A5K7X4R8
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All DBs
Position
1482470..1483369
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AA seq
299 aa
AA seq
DB search
MFGVININKPQGWSSRATLARVERLLRPVKVGHAGTLDPLAEGVLVACLGPATRLIDRVQ
RMPKEYDATFLLGRRSPSDDVDSDVELLAAPPQPTRAEIEALLPQFTGVIEQRPPAFSAV
KIEGQRAYKLARKGREVETSLRKVEVYEISLGRYEYPEFELAICCSSGTYVRSIGRDLAA
LLGTAAVMSALVRTAVGPFRVADAMNPRAPDLERLQQHLQSPLAAVPDLSLLTLTARQVF
DVQHGGLIKVDLLPPELQAYVACDEGLIAGVDEGGELITLLKEVRPGLLRPSPNFLQPA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcgtcatcaacatcaacaaaccgcaggggtggagctcgcgcgcgacgctcgcg
cgggtcgaacggctgctgcggccggtgaaggtggggcatgcgggaacgctcgatccgctg
gccgaaggagtgctcgtggcctgcctcggtccggcgacgcggctgatcgaccgtgtgcag
cggatgccgaaggagtatgacgccacctttttgttggggcgtcgcagccccagcgacgac
gtcgacagcgatgtggaattgcttgccgctccgccacagccgacgcgggcggagatcgag
gcgctgcttccgcaattcactggcgtgatcgagcaacggccgccggcgttctcggcggtg
aagatcgaggggcagcgtgcgtacaagctggcccggaaggggagggaagtcgagacctcg
ctgcgaaaggtcgaggtctacgagatctcgctcggccgctatgagtacccggaattcgag
ttggcgatctgctgcagcagcggcacctatgtgcgcagcatcggtcgcgatctggcggcg
ctcctcggaacggcggcggtaatgtcggcgctcgtgcggacggcggtcgggccgttccgc
gtcgccgacgcgatgaatccgcgggcgcccgacctcgagcgtttgcagcaacacttgcag
tcgccattggcggcagtgcctgacctgtcgctcctgacgctgacggcgagacaagtcttc
gacgtgcagcatggcgggttgatcaaggtcgatctgctaccgccggaattgcaggcgtac
gtcgcctgcgacgaggggctgattgccggcgtcgatgaaggtggcgaattgatcacgctt
ctgaaagaggttcgcccaggattgctgcgaccctcccccaactttctgcagccggcatag
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