Lacipirellula parvula: PLANPX_1647
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Entry
PLANPX_1647 CDS
T06590
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lpav
Lacipirellula parvula
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_1647
Enzymes [BR:
lpav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PLANPX_1647
DNA repair and recombination proteins [BR:
lpav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PLANPX_1647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
PWI
Motif
Other DBs
NCBI-ProteinID:
BBO32035
UniProt:
A0A5K7X6P3
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All DBs
Position
1865995..1869645
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AA seq
1216 aa
AA seq
DB search
MSKSTAPVSKLTDQQRAALDARDRSVSLSAGAGCGKTFVLTERFLSHVDPTQVERAELNE
IVAITFTDAAAREMRERIRNRCFQRLQAAGTETESAAWQRLMRSMDSARISTIHSFCTQL
LRAHAVEAGLDPQFEVLDAATAELVKLETVDDRLRALLLERNESVLDLAAKRGLDRVRTE
VAGLAGPLAMPAIERWRHATVDDVVARWQQYLAEEAAPSAIPDLLASEEAHRLRLIANPT
LAESDKLYRHLDDLNRALQLVSSTDDAEGDAAIATRTPSVLEANLMLDNLRDMAMVKGKC
TVKDWRDAEDFEEYKKACEVFRKRVDKSLLKKKFDETAARETAAQGLSLLRLVGDVTETL
ERSKSRRNQLEFDDLLARAHRLLTSPTNAAIRKELAGSTQLLMVDEFQDTNPLQVEIIQA
FCGDDWRERGLFAVGDFKQSIYRFNGAEPQVSLNLRNELPPPGRLSLTTNFRSQPAVTNF
VNAVFHGAFEQYEPLVPKREQATPVPAVEFLWTPGENSLADEEGAAADHAAETLGKKPKK
GRRAGAARDARAVEADWIARRLVQLLNSDEPVVVDMINNVATPRKLKPGDVAILLRTLSD
AQVYEEALRAHNLSYYLAGGHAFYSQQEIYDVLNLFRAVASEVDEIALAGALRSPLFSLT
DETLYWLVERHKSLNGALAAAERLPAELEAGEAVKVRRAAATINKLRLEKDRLLVADLFA
LAMERTGYDAVLLTEFLGPRKAANIEKLIEQARTLDRSSPGDLPGFITQLSEFVSRAPKE
ALAATQSEGGDVIRIMTIHYSKGLEFPLVVLPDLDRQRNAGTTTPVLDASLGPLVPLPSD
EREGLIGMDLYRYAEGVEDLAERRRLLYVACTRAADYLLISSNIDDPENPKRDLLQLIDQ
QVSIVDGSLRQPLPPGYAAPQIRVTDELPEVAEAKGTQSRGSNLDKLVASVRQLATKSSG
ALPRGSEPIPADARARRRFSFSQLTGALAVAREADLAGADDGEGLAANSLGLEKGDREGK
LLGTVAHAALERIDFRQSEEARAFCRSIAALMPDAVPEKTVERAADLVERFLQSPRAAEL
AAAKIVRREVEFLLPWPPAEEGGKSPADAETAQRYFHGYIDCLYQGADGRWRLLDFKTNR
TSAGNLDAVANQYEAQLLVYTLAIEQALGEPLAEVALVMLDSEVERKFNWEQRARAAHVK
QINQAIAGLLSPPARI
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcgacggcccccgtttcaaaactcaccgaccagcagcgtgcggcgctcgac
gcccgcgaccgctccgtttcgctttccgccggcgccggctgcggcaagacgttcgtgctg
acggagcgtttcctctcgcacgtcgatccgacgcaagttgagcgggcggagctgaatgaa
atcgttgccatcaccttcaccgacgccgcagcccgcgagatgcgcgagcggattcgcaac
cgttgcttccagcggttgcaggcggcgggaactgaaaccgagtcagcggcgtggcaacgc
ttgatgcggtcgatggatagcgcccgcattagcacgatccactcgttctgcacgcagctg
ctgcgggcgcacgcggtggaagcggggctcgatccgcagttcgaagttctcgacgccgcg
acggcggaactcgtgaagctcgagacggtcgacgatcggctgcgggctctgctgctcgaa
cggaacgaaagcgtgctcgatctggcggcgaagcgcggcctcgatcgcgttcgcaccgaa
gtagcgggactggcggggccgcttgcgatgccggcgatcgaacgctggcgccacgcgacc
gtcgacgacgtcgtagcccgttggcaacagtacctggccgaagaggcggcgccgtcggcg
attcccgacctgctcgccagcgaagaagcccaccggttgcggttgatcgcgaacccaacg
ctcgcggagagcgacaagctttatcggcatctcgacgatctcaatcgggcgctgcagttg
gtttcctcgacggacgacgcggagggcgacgccgcgatcgcgacgcgaacgccatctgtg
ctcgaggcgaatctcatgctcgacaacctccgcgacatggcgatggtgaaggggaagtgc
accgtcaaagattggcgcgacgccgaggatttcgaagagtacaaaaaggcgtgcgaggtc
ttccgcaaacgagtcgacaaaagtctgctgaaaaagaagttcgacgaaacggcggcccgc
gagacagcggcgcaggggctctcgttgctgcgactcgttggcgacgtgaccgaaacgctc
gaacgctcgaagtcgcggcgcaaccaattggagttcgacgacctgctcgcccgcgcccac
cgcttgctcacctcgccgacgaacgcggcgattcgcaaggaactcgccggcagcacgcag
ctgctaatggtcgacgagttccaggacaccaacccgctgcaggttgaaatcatccaggcc
ttctgcggcgacgattggcgcgagcggggactgttcgcggtcggcgatttcaagcagtcg
atttatcgcttcaacggcgccgagccgcaggtctcgctcaacctccgcaacgaattgccg
ccgccggggcggctgtcgctcaccacgaacttccgcagccagccggccgtcaccaatttc
gtgaacgcggtgttccacggcgcgttcgagcagtacgaaccgcttgtccccaagcgggag
caggcgacgcccgtgccggcggtcgagtttctgtggacgccgggcgagaacagcctcgcc
gatgaggagggcgccgcggcagaccatgcggccgagacgctcggcaagaaaccgaagaaa
ggccgcagagccggcgccgcgcgcgacgcccgtgcggtcgaagcggattggatcgctcgc
cggctcgtacaactcctcaactccgacgagccggtggtcgtcgacatgatcaacaacgtc
gcgacgccgcgcaaactaaaaccgggcgacgtggcgatcttgctccgtacgcttagcgat
gcccaggtgtacgaagaggcgctgcgggcccacaacctcagctactacctcgccggcggc
catgcgttttactcgcaacaagaaatctacgatgtgctgaatctgttccgcgccgtggcg
agcgaagtcgacgagatcgcactcgccggcgcgttgcggagtccgcttttttcgttgacg
gatgaaacactctactggctcgtcgagcggcacaagtcgctcaacggcgcccttgccgcg
gccgaacggctgccggcggagcttgaagctggcgaggcggtgaaagtccgccgggccgcg
gcgacgatcaacaaactgcgactcgagaaagatcggctgctcgtcgccgacctgttcgcg
ttggcgatggagcggaccggctacgacgccgtgctgctcaccgagtttctcggcccgcgc
aaggcggcgaacatcgagaagctgatcgagcaggcccgcacgctcgaccgcagttcgccc
ggcgacctgcctgggttcatcacgcagctgtcggagttcgtctcccgcgcgccgaaagaa
gcgctcgcggcgacgcaatccgaggggggcgacgtcatccgcatcatgacgattcactac
tcgaaggggcttgagtttccgctagtggtgctcccggatctcgatcgccaacgcaacgcc
ggcacaacgacgccggtgctcgacgcgtcgctcggcccgctcgtgccgttgccgtcggac
gagcgcgaggggctcatcggcatggatctctaccgctatgccgagggagtggaagacctc
gccgagcgacggcggctgctgtacgtcgcctgcacgcgggcggccgactacttgctcatc
agcagcaacatcgacgatcccgagaatcccaaacgcgatctgctgcagctgatcgatcag
caagtgagcatcgtcgacggttcgctgcggcagccgctgccgccagggtacgcggcgccg
cagattcgtgtgacggacgaactgcccgaagtggccgaggcgaagggaacgcagtcgcgc
ggttcgaatctcgacaagttggtggcaagcgtccgccaactcgcgacgaagagtagcggc
gcgttgccgcgaggcagtgaaccgattcctgccgacgcgcgtgcgaggagaaggttttcg
ttctcgcaactaaccggggcgctagcggttgcccgcgaggctgatctcgcaggagcggat
gacggagaagggctggctgctaattcgctcggcttggaaaagggagatcgcgaagggaag
ctgctcggtacggtcgcgcacgcggcgctcgaacggattgatttccgtcagtcggaagag
gcccgggctttctgccggtcgattgccgcgctgatgcccgatgccgtgcccgaaaaaaca
gtggagcgggctgccgatttggtcgagcggttcctgcaatccccgcgggcggcggagttg
gcggcggcgaagatcgtccgtcgcgaagtcgagttcctgctgccgtggccgccagcagag
gagggggggaagtcgcccgccgacgcagaaaccgcccagcgttacttccacggctacatc
gactgcctctaccaaggcgccgacggccgctggcggctgctcgacttcaaaacgaaccgc
acgtcggcggggaatttggatgcggtcgcgaaccaatacgaggcgcaactgctcgtctat
accctggcgatcgagcaagccctcggcgagccgctggcggaagtggcgctggtgatgctg
gactcggaggtcgagcggaagttcaattgggagcagcgggcgcgagcggcgcatgtgaag
cagatcaatcaagcgatcgccggtttactttccccgcctgcacgcatttag
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