Lacipirellula parvula: PLANPX_2213
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Entry
PLANPX_2213 CDS
T06590
Name
(GenBank) ribosome small subunit biogenesis RbfA-release protein RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav00730
Thiamine metabolism
lpav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PLANPX_2213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpav03009
]
PLANPX_2213
Enzymes [BR:
lpav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
PLANPX_2213
Ribosome biogenesis [BR:
lpav03009
]
Prokaryotic type
GTPases
PLANPX_2213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
GTP_EFTU
MMR_HSR1
nSTAND1
MMR_HSR1_Xtn
FeoB_N
AAA_16
AAA_29
BDI_0842
FhuF
Motif
Other DBs
NCBI-ProteinID:
BBO32601
UniProt:
A0A5K7XCQ1
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All DBs
Position
2459113..2460243
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AA seq
376 aa
AA seq
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MAKKKRQVRADFRKNRNVRAREKNWERGVDPESDQLDSVAQNESVSGKGALTRKRVIAGA
EIVEDGSGTSVQLSIDPEICRLGRVLRVQGLHSMVQLDDGSLRRCATRRILKTLATDQRH
VVAAGDRVWVRPERADEGIIERVEPRHGVLSRASRGRQHVLVTNVDQVIVVVSAAEPKLK
PHLVDRYLVMADRNGVEPIICINKADLVDAADLQPLIGVYSQLGYRVMLVSAERGWNIEH
LRRLLKDRQSAFAGQSGVGKSSLLNAVEPGLELRVRSVSSENEKGRHTTTTAELIPLAAG
GYVFDTPGIRQFQLWDVIPQEVAGFFRELRPYVSRCRYPNCSHNHEEPCAVKDAVADGFI
DVRRYESYLAMLDDEA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaaaacgccaagtccgcgctgattttcgcaagaatcgcaacgtccgcgct
cgcgaaaagaactgggagcgcggcgtcgaccccgagagcgatcagctcgacagcgttgct
cagaacgagagcgtcagcggcaagggagcgctcacgcgtaaacgcgtgatcgccggcgcc
gagattgtcgaagacggctccgggacgagcgttcagttgtcgatcgacccggagatttgt
cggctcggccgcgtgctgcgcgtccaggggttgcacagcatggtgcaactcgacgacggc
tcgctccgccgctgcgccacgcgacggatcctcaagacgctcgccaccgaccagcgacac
gtcgttgccgcgggagatcgggtttgggtccggcctgagcgtgcggacgaagggatcatc
gaacgagttgaacctcgacacggcgtccttagccgggctagccgcgggcgacagcacgtg
ctggtcaccaacgtcgaccaagtgattgtcgttgtgagcgccgctgaaccgaaactgaag
ccccacctggtcgatcgctacctcgtgatggccgaccggaatggcgtcgagccgatcatt
tgtatcaacaaagccgacctggtcgacgcggcagacttgcagccgctgatcggcgtctac
agccaactcggttaccgcgtgatgctcgtctccgccgagcgcggctggaacatcgagcac
ttgcgacggctattgaaagaccggcagtcggcgtttgcggggcaaagcggcgtcggcaag
tcgagtttgctcaacgccgtcgaaccaggccttgagctacgcgtccgctcggtaagtagc
gagaacgaaaagggtcgccacaccacgacgacggcggagttgattccgctcgccgcgggc
gggtacgtctttgatacgcccggcatccggcaattccaactgtgggacgtcatcccgcaa
gaagtcgccggcttcttccgcgagctacggccctacgtcagccgctgccgctatccgaac
tgctcgcacaaccacgaagagccatgtgccgtgaaggacgcggtcgccgatggttttatt
gatgtgcgacggtacgagagctacttggcgatgcttgacgacgaagcgtag
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