Lacipirellula parvula: PLANPX_2247
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Entry
PLANPX_2247 CDS
T06590
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lpav
Lacipirellula parvula
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpav03032
]
PLANPX_2247
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_2247
Enzymes [BR:
lpav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PLANPX_2247
DNA replication proteins [BR:
lpav03032
]
Prokaryotic type
DNA Topoisomerases
PLANPX_2247
DNA repair and recombination proteins [BR:
lpav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PLANPX_2247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BBO32635
UniProt:
A0A5K7X8D7
LinkDB
All DBs
Position
2493222..2494289
Genome browser
AA seq
355 aa
AA seq
DB search
MSRRLHFPSSLAPEDLARLARLRYVTDQEPGMGRRRHGQGFAYTTARGTPLRDPRKITRI
ETLAIPPAWRDVWICTVSAGHLQATGRDARERKQYIYHERWQEVAGLAKFARLAAFGAQL
PKLRRAIAAHLRGRSLTRERVLAGMLAVLDLTGIRVGNEEYVKENGSYGLASLRNRHVTI
GAHRVELRFRAKGGFHRNVEIDAPAVVRLIRDCAELAGSRVFQYLDADGKIHAVEAGEVN
EFLRELSGEEFTAKDFRTWKASTFAVGALFRAEVAETLTARKRTAREVVCATAEMLSNTP
AVCRNYYIHPGLLESFEAGTFRQEVGTATPRARNLFSTDEKLLMRFLKYWKPTLN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcgtcggttgcacttcccctcgtcgctcgccccggaagacctcgcccgtcttgcg
cggctacggtacgtcaccgaccaagagcccggcatgggccggcggcggcacggccaaggt
ttcgcttacacgacggctcgcggcacgccgctgcgcgatccgcgtaaaattacccgcatc
gaaacgctcgccattccgcccgcgtggcgcgacgtgtggatctgcacggtgagtgcgggc
cacctccaagccaccggtcgcgacgctcgcgagcggaagcagtacatttaccacgagcgg
tggcaggaggttgccggcctcgcgaagttcgcgcggctcgcggcgttcggcgcgcaactg
cccaagctccgccgcgcgatcgctgcgcacctgcgtggtcgtagcctgacgcgcgagcga
gtgcttgccggcatgttggccgtgctcgatctcaccggcattcgcgtcggcaacgaggaa
tacgtgaaggagaacggctcctacggcctcgcgtcgctccgcaaccgccatgtgacgatc
ggcgcccatcgcgtcgaactccgcttccgcgcgaagggaggctttcatcgcaacgtggaa
atcgacgctccggctgtcgtacgcctgatccgcgattgcgccgaattggcaggcagtcgc
gtctttcaatacctcgacgcggacggcaagattcacgctgtcgaggcaggcgaagtgaat
gagttcctccgcgagctcagcggcgaagagttcacagccaaagacttccgcacgtggaag
gcgtcgaccttcgccgtcggcgcgttgttccgtgcggaagtggcggagacccttacggct
cgcaagcggaccgctcgcgaggtggtgtgcgcgactgccgagatgctcagcaacacgccg
gccgtctgccgcaactattacatccacccggggctgctggagagctttgaggcaggaacc
tttcggcaagaagtcgggaccgcaacgccccgcgcccgcaacctattttccactgacgag
aaactcctcatgcggtttctgaagtactggaagccaacgctcaactag
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