Lacipirellula parvula: PLANPX_2271
Help
Entry
PLANPX_2271 CDS
T06590
Name
(GenBank) integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
lpav
Lacipirellula parvula
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpav03032
]
PLANPX_2271
03036 Chromosome and associated proteins [BR:
lpav03036
]
PLANPX_2271
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_2271
DNA replication proteins [BR:
lpav03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PLANPX_2271
Chromosome and associated proteins [BR:
lpav03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PLANPX_2271
DNA repair and recombination proteins [BR:
lpav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PLANPX_2271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF4011
Glyco_trans_1_2
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BBO32659
UniProt:
A0A5K7XI89
LinkDB
All DBs
Position
complement(2519014..2519421)
Genome browser
AA seq
135 aa
AA seq
DB search
MTKKEIVKTISEEIGLTQLKTKEIVQKTFDAIVETLVEDHRIELRNFGVFEVKRRAARKA
RNPRTGEKVFVPEKFVVTFKPGKEMEERVRELERRANEAARQQALQNGQVVDSPPATPPP
HETHGSATSYGQSPG
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagaaagaaatcgtgaagaccatctccgaagagattggcctcacgcagttgaag
acgaaagaaatcgtccagaaaacgttcgacgccatcgtcgaaacgttggttgaagatcat
cgcattgaactgcggaatttcggcgtcttcgaagtgaagcgacgagctgcccgcaaggcg
cgtaacccacgcaccggcgaaaaagtctttgtccccgaaaagtttgtggtcaccttcaaa
ccgggcaaagaaatggaagaacgagtccgcgagctcgagcgccgcgccaatgaggccgct
cgccagcaggctctccaaaatggccaggtcgtcgattcgccgcctgccacccctccgcca
cacgaaacacatggctccgcaacgagttacgggcaaagccccgggtaa
DBGET
integrated database retrieval system
