Lacipirellula parvula: PLANPX_2294
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Entry
PLANPX_2294 CDS
T06590
Name
(GenBank) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav00260
Glycine, serine and threonine metabolism
lpav00270
Cysteine and methionine metabolism
lpav00450
Selenocompound metabolism
lpav00670
One carbon pool by folate
lpav01100
Metabolic pathways
lpav01110
Biosynthesis of secondary metabolites
lpav01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PLANPX_2294
00270 Cysteine and methionine metabolism
PLANPX_2294
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PLANPX_2294
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PLANPX_2294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpav04147
]
PLANPX_2294
Enzymes [BR:
lpav01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
PLANPX_2294
Exosome [BR:
lpav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PLANPX_2294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
GDC-P
DUF4350
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
BBO32682
UniProt:
A0A5K7X9Y7
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All DBs
Position
2546852..2547997
Genome browser
AA seq
381 aa
AA seq
DB search
MQFRTRAIHVGNEPCAETGAVVPPIHLATTFIQPGAGDWGEFDYSRSGNPTRKNFETTLA
SLEGGVGALAFSTGMAATHCVIASLKSGDHVVAGSDIYGGSYRLLHKIANRAGITVTLVD
TTDLARVEAAFTPATRLLWIESPGNPRMSITDIEACAKLAHRHGALLGIDSTFATPVLTR
PLELGADIVMHSATKYIGGHSDAMGGALVVRDAALLKELYFVQNATGAVMGPLEAFLCSR
GLKTLELRVREQCRTAQQLAEWLASHSRVARVLYPGLPSHPGHELARKQMGGQFGAMMSF
EIKGDLADGKRFAESTKLFGLAVSLGAVESLIEQPASMSHASYDAADRAKHGIADGLIRI
SVGLEAYEDLRSDLESAFGAI
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcaattccgcacccgcgccatccacgtcggcaacgagccgtgcgccgaaaccggcgcc
gtcgtgccgccgatccatctggcgaccactttcatccaaccaggcgccggcgattggggc
gagttcgattactcccgcagcggcaacccgacgcggaagaattttgaaacgaccctcgct
tcgctcgaagggggcgtcggcgccttggcgttctccaccggtatggcggcgacccactgc
gtcattgcttcgctgaagagcggcgaccacgtcgtcgccggcagcgacatctacggcggc
agctaccggctgctccacaaaatcgccaatcgcgccggcatcacggtgacgctcgtcgac
acgactgatctcgcgagggtcgaagccgccttcacccccgcgacgcggctcctctggatc
gaaagccccggcaacccgcgcatgtcgatcaccgacatcgaagcctgcgcgaagctcgcc
catcgccacggcgccctcctcggcatcgacagcaccttcgcgacgccggtcctcacgcgg
ccgcttgaactcggcgccgacatcgtgatgcactcggccaccaaatacatcggcggtcac
agcgatgcgatgggcggcgcgctcgtcgtccgcgacgcggcgctgctcaaggaactctac
tttgtgcagaacgccaccggcgccgtcatggggccgcttgaagccttcctctgctcccgc
gggctaaagacgctcgaactccgcgttcgcgagcaatgccgcactgcgcagcagctggcc
gagtggctcgcttcccactcccgcgtcgcgcgggtactctacccagggttaccaagccat
cccggccacgaacttgctcgcaagcaaatgggcggccagtttggcgccatgatgtcgttc
gagatcaagggcgacctcgccgatggcaagcgatttgcagagtcgaccaaactgttcggc
ctcgctgtgagcctcggcgccgtcgagtcgttgatcgaacagccggcgtcgatgtcgcac
gctagctacgacgcggccgaccgcgcgaagcacggcatcgccgacgggctgattcggatt
tcggtcggcctcgaagcgtacgaggatttgcgcagcgatttggaatcggcgttcggcgcg
atttaa
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