Lacipirellula parvula: PLANPX_2354
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Entry
PLANPX_2354 CDS
T06590
Name
(GenBank) ribosomal protein S12p methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lpav
Lacipirellula parvula
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpav03009
]
PLANPX_2354
Enzymes [BR:
lpav01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PLANPX_2354
Ribosome biogenesis [BR:
lpav03009
]
Prokaryotic type
ribosomal protein modification factors
PLANPX_2354
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BBO32742
UniProt:
A0A5K7XA39
LinkDB
All DBs
Position
complement(2612254..2613675)
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AA seq
473 aa
AA seq
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MSSQLPILPSTPPAPAAPAGADPSFVKGKYCFISLGCPKNLVDSERMLGLLQLDGYKLVN
TPEEADFAVVNTCGFIEAARAESFGAIDEMLALKRRGDLRGVIVSGCLAERQQEALLVER
PDIDHLVGVFGREHVTKVADRLLGGLEEQRNIFQPAPTHPLPDTARLRITPKHFAFLKIS
EGCDRLCTFCAIPKMRGKHATKPIEEVVAEARELAADGVRELVIVAQDTTYYGKDLYGEP
RLVELLRELEKVEGLDWVRLMYLYPMYFTDELIDVIAGSQRIVPYLDMPLQHINDTMLRR
MQRRVKRAETEELLGKLRSKIPNLVMRTTFITGFPGETDEQFNELVDFVAEQKFERAGVF
TYSLEPDTPAAKLPDHVPTEVMDERREILMAVQQEIAFEWNERQQGRELDVLIDSAVPGE
RDVWIGRSYADAPDVDGIVYVTGKGLATGKIAPCEIVASKEYDLVGALSGKPR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcagttgcctatccttccgagcactccccctgccccggcagcgcccgccgga
gccgatccttcgttcgtcaaggggaagtactgcttcatcagcctcggctgtcccaagaac
ttggtcgacagcgagcggatgctcggcctgctccagctcgacggctacaagctcgtgaac
acccccgaggaagccgacttcgcggtggtcaacacctgcggcttcatcgaggcggcccgc
gctgaatcgttcggcgccatcgacgaaatgctcgccctgaagcgccgtggcgacttgcgc
ggcgtcatcgtttcgggctgcctcgccgaacgccagcaagaggcgctgctcgtcgagcgt
cccgacatcgaccacctcgtcggcgtcttcggccgcgagcacgtcactaaggtcgccgac
cggttgctcggcggtttggaagaacagcgcaacatcttccaaccagcgccgacgcacccg
ctccccgacacggcccgcctgcgcatcacgccgaagcacttcgccttcctgaagatctcc
gaaggctgcgaccgcctttgcaccttctgcgcgatcccgaagatgcgcggcaagcatgcg
acgaagccgatcgaagaggtcgtcgccgaagcccgcgaactcgccgccgacggcgttcgc
gaactggtgatcgtcgcgcaagacaccacttactacggcaaagatctctacggcgaaccg
cgcctcgtcgagctgcttcgcgaactcgaaaaggtcgaaggcctcgactgggtccggttg
atgtacctctacccgatgtacttcaccgacgagctgatcgacgtcatcgccggcagccag
cggatcgtgccgtacctcgacatgccgctgcagcacatcaacgacacgatgctccgccgc
atgcagcgccgcgtgaagcgagccgagaccgaagaactcctcggcaagctacggtcgaag
attccgaacctcgtgatgcggaccaccttcatcaccggcttccccggcgaaaccgacgag
cagttcaacgaactggtcgacttcgtcgccgagcaaaagttcgaacgggccggcgtcttc
acctattccttggagcccgacacccccgcggccaagctacccgatcatgtcccaacggaa
gtgatggacgaacgccgcgagatcctgatggccgtccagcaggagatcgcgttcgagtgg
aacgagcgtcagcaagggcgagaactcgacgtgctgatcgactcggccgtgccgggcgaa
cgcgacgtttggatcggccgctcgtacgccgacgcccccgacgtcgacggcatcgtctac
gtgacgggcaaagggctggcgaccggcaagatcgccccatgtgaaattgtggcaagcaag
gagtatgatttagtaggagcactgagcggcaaacctcgctaa
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