Lacipirellula parvula: PLANPX_2487
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Entry
PLANPX_2487 CDS
T06590
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PLANPX_2487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpav03019
]
PLANPX_2487
03110 Chaperones and folding catalysts [BR:
lpav03110
]
PLANPX_2487
03029 Mitochondrial biogenesis [BR:
lpav03029
]
PLANPX_2487
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpav04147
]
PLANPX_2487
Enzymes [BR:
lpav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PLANPX_2487
Messenger RNA biogenesis [BR:
lpav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PLANPX_2487
Chaperones and folding catalysts [BR:
lpav03110
]
Heat shock proteins
HSP60 / Chaperonin
PLANPX_2487
Mitochondrial biogenesis [BR:
lpav03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PLANPX_2487
Exosome [BR:
lpav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PLANPX_2487
Exosomal proteins of other body fluids (saliva and urine)
PLANPX_2487
Exosomal proteins of breast cancer cells
PLANPX_2487
Exosomal proteins of colorectal cancer cells
PLANPX_2487
Exosomal proteins of bladder cancer cells
PLANPX_2487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CoV_NSP8
Motif
Other DBs
NCBI-ProteinID:
BBO32875
UniProt:
A0A5K7X947
LinkDB
All DBs
Position
2779530..2781149
Genome browser
AA seq
539 aa
AA seq
DB search
MPKQLMFDDAARAKLLRGVDKLADAVAVTMGPTGRNVIINKSFGGPTVTKDGVTVSKEIE
LEDPFENMGAKLVHEVADKTSSLAGDGTTTATVLARAILREGARNIVAGSNPMAVQRGIR
KGVEAAVAKLDEMSKKVSSKEQIAQVGAISANNDRVIGDLLADAMEKVGKDGVITVEEGK
STETTLEFVEGMQFDKGYLSPYFINQTADMACVLNDAYILIHEKKISNLRELVPILEQAS
QKAKPILIIAEDVEGEALAALVVNKLRGILNICAVKAPGFGDRRKAMLGDIAALTGGTLI
SEDLGIKLESVTLEQLGRAKKITVTKDNSTIVQGGGSNADVKKRIDQLRKGIEGTTSDYD
REKLQERLAKLTGGVAIVSVGANSEAEMKQKKARVEDALHATRAAVEEGILPGGGVALIR
CKEAVEAARSGAKGDEKIGVNIVAGVLSAPLKQIADNCGLDGSVVADEVSRKSNSIGYDA
NNGEYVDMFKAGVIDPTKVVKTALSNAASIAGLILTTEALVTNLDGKDQDKRAVSGSVR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
gtgccaaagcaactcatgttcgacgacgcagcccgggcgaagctgctccgcggcgtcgac
aagctggccgacgcggtggccgtcaccatgggccccaccggccgcaacgtcatcatcaac
aagtccttcggcggtcccaccgtcacgaaggacggcgtcaccgtcagcaaggaaatcgag
ctcgaagaccccttcgaaaacatgggcgctaagctcgtgcacgaagtggccgacaagacc
tcctcgcttgccggcgacggcaccaccaccgccaccgtgctcgctcgcgccatcctccgc
gaaggcgcccgcaacattgtggccggcagcaacccgatggccgtccaacgcggcattcgc
aagggcgtcgaagccgccgtcgcgaagctcgacgaaatgagcaagaaggtctccagcaag
gagcaaatcgctcaagtcggcgccatcagcgcgaacaacgatcgcgtcatcggcgacctg
ctcgccgacgcgatggagaaggtcggcaaggacggcgtcatcaccgtcgaagaaggcaag
tcgactgaaacgaccctcgagttcgtcgaaggcatgcagttcgataagggctacctgtcg
ccctacttcatcaaccaaaccgccgacatggcgtgcgtcctcaacgacgcctacatcctg
atccacgaaaagaagatcagcaacctccgcgagttggtgccgatcctcgagcaggccagc
caaaaggcgaagccgattctgatcatcgccgaagacgtcgaaggtgaagccctcgccgct
ttggtggtgaacaagctccgcggcatcctcaacatctgcgccgtgaaggcccctggcttc
ggcgatcgtcgcaaggcgatgctcggcgacattgcagccctcactggcggcacgctgatt
agcgaagacctcggcatcaagctcgagagcgtcacgctcgaacagctcggccgtgcgaag
aagatcaccgtcaccaaggacaacagcacgattgtccaaggcggcggctcgaacgccgac
gtcaagaagcggatcgatcaactgcgtaagggcatcgaagggaccaccagcgattacgat
cgcgaaaagctccaagagcggctcgcgaagctcactggcggcgtggccatcgtttcggtc
ggcgccaacagcgaagccgaaatgaagcaaaagaaggcccgcgtcgaagacgccctccac
gccacccgtgcggcggtcgaggaaggcattcttcccggcggcggcgtcgccctcatccgc
tgcaaggaagcggtcgaggcggctcgcagcggcgccaagggtgacgagaagatcggcgtc
aatatcgtcgccggcgtcctcagcgccccgctgaagcaaatcgccgacaactgcggtctc
gacggcagcgtcgtcgccgacgaagtcagccgcaagtcgaacagcatcggctacgacgcc
aacaacggcgaatacgtcgacatgttcaaggcgggcgtcatcgacccgaccaaggtggtg
aagaccgccctttcgaacgccgcgagcattgccggcctgatcctcacgaccgaagccctg
gtgacgaaccttgacgggaaggaccaggacaagcgtgcggtatcgggcagcgtccggtaa
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