Lacipirellula parvula: PLANPX_2504
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Entry
PLANPX_2504 CDS
T06590
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav03420
Nucleotide excision repair
lpav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PLANPX_2504
03430 Mismatch repair
PLANPX_2504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_2504
Enzymes [BR:
lpav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PLANPX_2504
DNA repair and recombination proteins [BR:
lpav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PLANPX_2504
MMR (mismatch excision repair)
Other MMR factors
PLANPX_2504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
BBO32892
UniProt:
A0A5K7XAD4
LinkDB
All DBs
Position
complement(2797761..2799890)
Genome browser
AA seq
709 aa
AA seq
DB search
MAHGLNPAQHAAVETLSGPLLVLAGAGTGKTRVVTTRIANLIKHRIKPDRILAVTFTRKA
AGEMQERALALLGGPEKPGKTHRRAKPKGPKIRPQISTFHALCVQVLRRHITQLGYPPQF
AICDRGDQESLARTSLRDIRCPEDSLRPGDLLAIISNWKNKSLRPMQAASEATSDKEHLA
AAAYRRYQSSLKARGMVDFDDLLLCTEELFTKYPAIRREEAGHFDHVLVDEYQDTNGSQY
RIVKALAMGHRNLCVVGDDDQSIYGWRGAEVEHILRFKEDWPDAKVVRLEENYRSAGAIL
EYANTLIAFNKKRHDKILRPARGAGQRPIIMQLPDEAQEAERVVGDIHMQLTQPGMQAKD
FAILCRTNEQPRAFETELRRLKLPYILVGGQSFFDRKEVRDLLAYLKTVENPTDETSLLR
IINTPPRGIGNATVKQLLAEAVNRGEPIWTVLREAAGGGGATGNAIGKFVKLIGELKEIA
DRGAPVDKLVDAVVDRTQYRRELDRLYPDPMEREARTASIEELINAGAAYNKGKKTKKDE
EEIPLLRGFLDDVALGGSDNRDEKEDQLQRNAIALMTLHSAKGLEFPYVYMVGMEEGILP
HKRTLEMPDESQIDEERRLCYVGVTRAQEKLTMSFALTRRKWGKPKDTVPSRFLYEMTGQ
AENAAKARAAAAATLGPHKKHPAAKGAGGPKGGKGAKGAKGSQSRSPRR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggctcacggactgaatcccgcccaacacgctgccgttgagacgctaagcggcccgttg
ctcgttttagccggggctgggacggggaagacccgcgtcgtgacgacgcggattgcgaat
ctcatcaagcatcggatcaagcccgatcggattctggcggtgacgttcacccgcaaggcg
gcgggcgagatgcaggagcgggcgctggccctgctcggcgggccggaaaagcccggcaag
acgcatcgcagagcgaagccgaaggggccgaagattcggccgcagatttcgaccttccac
gcactgtgcgtccaggtgctgcggcggcacatcactcagctgggttatcccccccagttc
gccatttgcgatcggggcgaccaggagtcgctcgcgcggacctcgctgcgcgacattcgc
tgccccgaagattcgctgcgaccgggcgacctgttggcgatcattagcaactggaaaaac
aaatcgctgcggccgatgcaagcggcgtcggaggcgacgagcgataaggagcatctcgcc
gccgcggcttatcggcgctaccaaagcagcctgaaggctcgcgggatggtcgacttcgac
gacttgctcctctgcacggaggagttgttcaccaagtatccggccatccgccgcgaggag
gcagggcatttcgaccacgtgctggtcgatgaatatcaggacaccaacggcagccagtac
cgcatcgtcaaagcgctggcgatggggcatcgcaacttgtgcgtcgtgggcgacgacgac
cagtcgatttacggctggcgcggcgccgaggtcgagcacattttgcggttcaaagaagat
tggcccgacgcgaaggtcgtgcggcttgaggagaactaccgctcggccggggccattctc
gaatacgccaacacgctcattgcgttcaacaaaaagcggcacgacaaaatcttgcggccc
gcccgcggcgccggacagcggccgatcatcatgcagctgcctgatgaggcgcaggaagcg
gaacgggtggttggcgacatccacatgcagctgacgcagcccggaatgcaggcgaaagat
tttgcgatcctgtgtcgcacaaacgagcagccgcgggcgttcgaaaccgaactgcgacgg
ctgaagctgccgtacattctggtcggcgggcaatcgttcttcgatcgcaaggaagtccgc
gacctgctggcgtacctgaagacagtcgagaacccgaccgacgaaacgtcgctgctgcgg
attatcaacacgccgccgcgcgggatcggcaacgctacagtaaagcaactgttggccgag
gcggtgaatcgcggcgagccgatttggaccgtgctgcgcgaagcggccggcggcggcgga
gccacgggcaacgcgattgggaaatttgtgaaactcattggcgaattgaaagagatcgcc
gatcgcggggcgccggtcgacaagctggtcgacgcggtggtcgaccgcacgcagtatcgc
cgcgagctcgatcggctctatcctgatcccatggaacgcgaggcccgcaccgcgtcgatc
gaggaactgatcaacgccggcgccgcgtacaacaaagggaagaagacgaagaaggacgaa
gaggaaattccactgctccgcggattcctcgacgacgtcgccctcggcggcagcgacaac
cgcgacgagaaagaggaccagctgcaacgcaacgcgatcgcgctgatgacgctccactca
gcgaaggggctggagtttccgtacgtttacatggtggggatggaggaagggattctgccc
cacaagcggacgctcgaaatgccggacgaatcgcaaatcgacgaagagcgacggctctgc
tacgtcggcgtcacgcgggcgcaagagaagctgacgatgtcgttcgccctcacgcggcgg
aagtgggggaagccgaaggacacggtgccgagccggtttttgtacgagatgaccgggcag
gcggagaatgcggcgaaagcgcgggcggcggctgcggccactcttggaccgcataagaag
cacccggcggcgaagggagctggcgggccgaaggggggcaaaggggctaagggagcgaaa
ggttcgcaatcgcgctcgccgcggcggtag
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