Lacipirellula parvula: PLANPX_2642
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Entry
PLANPX_2642 CDS
T06590
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav03420
Nucleotide excision repair
lpav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PLANPX_2642
03430 Mismatch repair
PLANPX_2642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_2642
Enzymes [BR:
lpav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PLANPX_2642
DNA repair and recombination proteins [BR:
lpav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PLANPX_2642
MMR (mismatch excision repair)
Other MMR factors
PLANPX_2642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
BBO33030
UniProt:
A0A5K7X8Q4
LinkDB
All DBs
Position
complement(2955439..2957781)
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AA seq
780 aa
AA seq
DB search
MDPLFANLNPAQCEAVRHVEGPMLVLAGPGSGKTRVVTHRIAHLLREGVRPREILALTFT
NKASEEMKLRVETMSPGSRVWVSTFHRFGARLLREYAGFVGLTPNFTIYDTDDSRQTLKR
VIEAGKIRTAHYSPDRIAAAISAAKNQLITADRYEPRIGSPLSQIVAEVYPAYQQRLLAS
SAVDFDDLLLHVANMLYVNDDVRAELDERYRFILVDEYQDTNRAQYVMVRAMSVDHPNLA
ATGDPDQSIYGWRGADIKNILQFETDFPQVRVVRLEQNYRSTKAVLRVADQLIRSNMRRK
AKSLFTDNAEGDPVKLVQYSTQDDEARGIADQIAAGIAAGRRPRDFAIFYRVNALSRVLE
RGLREHGIPYQMIRGQEFYQRKEIKDVLAYCQLINNPRDDQATLRTINTPVRGIGRKTID
RLSEFAYQHGISLLDACREAGQVEGLNARAIKSVAQFAALIDRLSLLAGAALEEILGTIL
TETKYREGLQDSESEDDLNRLANIEELLTDARQFDEAHPGGGHLEEYLENAWLVNETDSW
ETESDKVTMMTLHAAKGLEFPVVFVVAFEQGLLPHERSLNDDEQMEEERRLAFVGITRAK
EHLQLSYAVHRDFRGQRRRTVPSPFLLEMPREEMELVSIGAPGGWDVPTDWEDVHDLHDD
SHHFEIDPAVDDHGVEAEAPTEDDDSFAFGANAAPAPAKSIPASQVTTAARLAGAKPLAA
SGISPDAFAQGMTVMHPEHGPGKIVALSGSGANRRATVKFATAGERRFVLAHSPLRPAGR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
gtggacccgctgttcgccaacctcaatcccgcccaatgcgaagccgtccgccacgtcgaa
gggccgatgctcgtcctcgccggccccggcagcggcaagacccgcgtcgtcacccaccgc
atcgctcacctgctgcgcgaaggggtccgcccgcgcgagattctcgccctcaccttcacg
aacaaagcgtcggaggagatgaagctccgcgtcgagacgatgtcccccggctcgcgcgtc
tgggttagcaccttccatcgcttcggcgcccggctgctgcgcgagtacgccggcttcgtc
ggcctgacgcccaacttcacgatctacgacaccgacgactcccgccaaacgctcaagcgc
gtcatcgaggccggcaagatccgcacggcccattactcgcccgaccgcatcgccgccgcg
atcagcgccgcgaagaaccagctcattaccgccgatcgctacgaaccccgcatcggcagc
ccgctcagccaaatcgtcgccgaggtttaccccgcttaccagcaacgcttgctcgcctcg
tcggcagtcgacttcgacgacttgctgctgcacgtcgcgaacatgctctacgtaaacgac
gacgtccgcgccgagctcgacgaacgctatcgcttcatcctcgtcgatgagtatcaagac
acgaaccgggcgcaatacgtgatggttcgcgcaatgtcggtcgaccacccgaatctcgcc
gccacgggcgaccccgatcaatcgatctacggttggcgcggcgccgacatcaaaaacatc
ctgcagttcgagaccgacttcccgcaggtccgcgtcgttcggctcgagcaaaactaccgc
agcacgaaggcggtgctccgcgtcgccgatcagctcattcgctcgaacatgcgccgcaag
gcgaagtcgctcttcaccgacaacgccgaaggcgatccggtgaagctcgtgcagtattcg
acgcaagacgacgaagcccgcggcatcgccgatcagatcgcggcaggtatcgccgccggc
cgtcgaccgcgcgactttgcgatcttctaccgcgtcaacgccctctcgcgcgtgcttgag
cgtgggctccgcgagcatggcatcccctaccagatgatccgcggccaagagttctatcag
cgcaaagaaatcaaggacgtgctggcctactgccaactgatcaacaacccgcgcgacgat
caggcgacgctccgtacgatcaacacgccggtccgcggcatcggccgcaagacgatcgac
cgcctcagcgagttcgcctaccagcacggcatctcgctcctcgacgcctgccgcgaagcg
gggcaagtcgaagggctgaacgcccgcgcgatcaagtcggttgcccagttcgcagcctta
atcgatagactcagcttgctggccggcgccgcactcgaggaaatcctcggcaccatcctc
acggaaacgaaatatcgcgagggcctgcaagacagcgaatcggaagacgacctcaatcgc
ctcgccaacatcgaagaactcctcaccgacgcgcggcagttcgacgaagcccaccccggc
ggcggccacttggaggagtacctcgagaacgcttggctcgtcaacgagacagacagttgg
gagaccgagagcgacaaagtgacgatgatgaccctacacgccgcgaaggggctcgagttt
cccgtcgtgttcgtcgtcgcgttcgagcaaggcctgctcccgcacgagcggagtctcaac
gacgacgagcaaatggaagaagaacggcggctagcgttcgtcggcattacccgcgcgaag
gagcacctgcaactcagctacgccgtccaccgcgacttccgcggccaacgccgtcgcacc
gtgccgagcccgttcctattagaaatgccgcgtgaagagatggagttggtctcgatcggc
gcccccggcggctgggacgtgccgacggactgggaggacgttcacgacctgcacgacgac
tcgcaccacttcgaaatcgacccggccgtcgacgatcacggcgtcgaagcagaagcgcca
acggaagacgacgactcgttcgcattcggcgccaacgccgcgcccgctcccgccaagtcg
atccccgcgtcgcaagtcacgacggccgcccgtctcgccggcgcgaaaccgctcgccgcc
tcaggcatctcgcccgatgccttcgcacagggaatgacggtgatgcaccccgagcatggc
ccgggtaagatcgtcgccctcagcggcagcggcgccaaccgccgcgcgacagtgaaattc
gctacagccggcgaacgccgcttcgtcctcgcccacagccccctacgacccgcggggcgg
tga
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