Lacipirellula parvula: PLANPX_2704
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Entry
PLANPX_2704 CDS
T06590
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lpav
Lacipirellula parvula
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PLANPX_2704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpav03019
]
PLANPX_2704
03009 Ribosome biogenesis [BR:
lpav03009
]
PLANPX_2704
03036 Chromosome and associated proteins [BR:
lpav03036
]
PLANPX_2704
Enzymes [BR:
lpav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PLANPX_2704
Messenger RNA biogenesis [BR:
lpav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PLANPX_2704
Ribosome biogenesis [BR:
lpav03009
]
Eukaryotic type
90S particles
RNase
PLANPX_2704
Prokaryotic type
rRNA processing factors
PLANPX_2704
Chromosome and associated proteins [BR:
lpav03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PLANPX_2704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
BBO33092
UniProt:
A0A5K7XAW8
LinkDB
All DBs
Position
complement(3017784..3018557)
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AA seq
257 aa
AA seq
DB search
MSTNTVSDASDVRRGDLEVCQQQIGYAFREPQLLEGALTHASGVQHRLSSNERMEFFGDA
ILGMVVCERLFQQYPEYSEGELTKIKSVVVSRDTCARMSEALGLDVHLILGKGMAADPTV
PRSVLAAAFESLIAAIYLDGGMPAAEQFILRHVDGEIEAAVSCEFGGNFKSLLQQLAQRE
FGVTPNYIMLDEKGPDHSKCFKISAQIGSRRFTAAWGKSKKESEQRAAHNAISELREESA
PYPCEDSAGNVSDDAAD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaatactgtgtctgacgccagcgatgtgcgccgtggcgatcttgaagtttgt
cagcagcaaattggctatgcgtttcgcgagccgcagctgctggaaggcgccctcacccac
gcttcgggcgtgcagcatcggctctcctccaacgagcggatggaattcttcggcgacgcg
atcctcggcatggtcgtttgcgaacggctgtttcagcaataccccgaatactccgaaggg
gaactgacgaagatcaaatcagtcgtcgttagtcgcgatacgtgcgcacggatgagcgaa
gcgctcgggctcgatgtccacctcattctcggcaaagggatggccgccgatcccaccgtt
ccccgttcggtgctcgccgctgcctttgagtcgctcatcgccgcgatctaccttgatggc
ggcatgccggcggccgagcagttcatcttgcgtcacgtcgacggcgagatcgaagcggcc
gtgtcgtgcgaattcggcggcaacttcaagtcgctgctgcaacagctcgcccagcgcgag
ttcggcgtgactcccaactacatcatgctcgacgagaagggtccggatcacagcaagtgc
ttcaagatctcggcccagatcggctcgcggcgcttcacggctgcgtggggcaagagcaag
aaagaatcggaacaacgggcggcccacaacgcgatcagcgaattgcgtgaagagtcggcg
ccctacccgtgcgaggacagcgcggggaacgtctcggatgacgccgcggattga
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