Lacipirellula parvula: PLANPX_2958
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Entry
PLANPX_2958 CDS
T06590
Name
(GenBank) alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav00511
Other glycan degradation
lpav04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
PLANPX_2958
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
PLANPX_2958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpav04147
]
PLANPX_2958
Enzymes [BR:
lpav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
PLANPX_2958
Exosome [BR:
lpav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PLANPX_2958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
F5_F8_type_C
F5_F8_type_C_2
DUF7402
GHL6
Fucosidase_C
CBM_AftD
Motif
Other DBs
NCBI-ProteinID:
BBO33346
UniProt:
A0A5K7XGD4
LinkDB
All DBs
Position
complement(3294113..3295924)
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AA seq
603 aa
AA seq
DB search
MNLRRTFLGWLMSGAVALLVCAGMIGSQQLVAAAEANPTANGSVRTVDQTTSDAIKAWQA
KRFGMFIHWGPVALKGTEIGWSRGKEVSAEEYDELYKQFNPTEFDAKSWAKIAKTAGMKY
LVLTTKHHDGFCLWPSKYDEYNISATPFKRDVVGELAEACRAEGIQFCAYYSLPDWRGID
YPLASPGGSVKSTNPNMPRHYQLIKDQTKELLDNYGPLGLMWFDGDWEDPWTLEYGNGLY
DYLKAIQPDLVINNRVSKTRISPEEKAARGLHIAGDYDTPEQRIGGFDRDIPWETCMTIC
EQWAWKPSDHLKPLKQCLQSLIQTAGGDGNFLFNVGPMPSGQIEPRQVERLREMGAWLEK
YGDGIYDTRGGPFMPGDWGAATCKDNSVFLFVMNWPDVGPLRLPAIDWNITAFKIRSGGQ
LSVKQTSDGIEIDVPPADRQEIATVIELTLDGPALSITPLPVKLLSGSLAVNQKASASNV
FQNDGGYDASRAFDDDSKTRWATDGGVRDAWLQVDFEQPTTINLAKIDEPTEYQRIQRFE
LQYDDGAGWKTLHRGAEVGPQRVIEFAPVTARRVRLQVLDAKDGPTINEFRLFGPGAATA
PQS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcgacgcactttcctcggctggctcatgagcggcgccgtcgcgttgctcgtt
tgcgctggaatgatcggctctcagcaattggtggccgctgcggaagcgaatccgactgcc
aacgggtcggttagaaccgtggaccaaaccacttccgacgccatcaaagcatggcaagcg
aagcggttcggcatgttcatccactggggaccggtcgcgctgaagggaaccgaaatcggc
tggtcgcgcggcaaagaagtctccgcggaagagtacgacgagctttataagcagtttaat
ccgactgagttcgatgcgaaatcgtgggccaaaatcgccaaaacggccgggatgaagtac
ctcgtgctcacgacgaagcaccacgacggcttctgcctctggccatcgaagtacgacgag
tacaacatcagcgcgacccccttcaagcgggacgtcgtcggcgaactggcggaagcatgt
cgggcggagggaattcagttttgcgcctactactcgcttccggattggcgcggcatcgac
tatccgctcgcctcgcccggcggttcggtgaagagcacgaatccgaacatgccgcggcat
taccagctgatcaaagaccaaacgaaagagttgctcgacaactacggtccgctagggttg
atgtggtttgacggcgattgggaagacccgtggacgcttgagtacggcaatggactttac
gattacttgaaagcgattcagcctgacttggtgatcaacaaccgcgtcagcaagacgcgc
atctcgccggaggagaaggcagcacgagggctgcatatcgcgggcgattacgacactcca
gagcagcgcattggcggcttcgatcgcgacataccgtgggaaacgtgtatgacgatttgc
gagcaatgggcgtggaagcccagcgatcacctcaagccgctcaagcaatgcttgcagtcg
ttgattcaaacggccggcggcgacggcaactttctgttcaacgtcgggccaatgcccagc
ggccagatcgaaccgcggcaagtcgaacgactccgcgaaatgggcgcctggctggaaaag
tacggcgacggcatttacgacacgcgcggcgggccgttcatgccgggcgattggggcgca
gcgacttgcaaggataacagtgtcttcctgttcgtgatgaattggcctgacgttggtccg
ctgcggttgccggcgattgattggaacatcaccgcattcaagattcgcagcggcggccag
ctctcagtgaaacaaacgagcgatgggattgaaatcgatgtgcctcctgccgatcggcag
gaaattgcaacggtcattgaactgacgctcgatggccctgccctgtcgatcacgccgctg
ccggtgaagctgctgagcggctcgctggccgtgaatcagaaggcttcggcttccaatgtg
tttcaaaacgatggcggctacgacgccagccgcgcgtttgacgacgactcgaagacacgg
tgggcgacggacggcggcgtgcgcgacgcttggctgcaggtcgacttcgaacagcccacg
acgatcaatctcgcgaaaattgacgagccgaccgagtaccagcggatccagcgatttgaa
ctgcaatacgacgacggcgctggttggaaaacgcttcaccgcggcgccgaggtcgggccg
cagcgagtgattgaattcgcgcctgtcacggcacgtcgcgtgcggctccaagtgctcgac
gcgaaggatggtccgacgatcaacgagtttcgcctctttggcccgggcgcggcaaccgct
ccgcaatcatga
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