Lacipirellula parvula: PLANPX_3190
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Entry
PLANPX_3190 CDS
T06590
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav03030
DNA replication
lpav03410
Base excision repair
lpav03420
Nucleotide excision repair
lpav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PLANPX_3190
03410 Base excision repair
PLANPX_3190
03420 Nucleotide excision repair
PLANPX_3190
03440 Homologous recombination
PLANPX_3190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpav03032
]
PLANPX_3190
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_3190
Enzymes [BR:
lpav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PLANPX_3190
DNA replication proteins [BR:
lpav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PLANPX_3190
DNA repair and recombination proteins [BR:
lpav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PLANPX_3190
NER (nucleotide excision repair)
GGR (global genome repair) factors
PLANPX_3190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BBO33578
UniProt:
A0A5K7XAL0
LinkDB
All DBs
Position
3556756..3559659
Genome browser
AA seq
967 aa
AA seq
DB search
MAKRARQTTFPGMDEPEPQPAAKASRAAAGLVVNHAAAPAEDSTPAGPLAICDWTIYVVD
SYSLIFQVFHAMSGSELTSPRGEPVGAVYGFTRDLVQLMERKQPTALLCAFDLSGPTFRH
EMYDSYKADRSEMPESLSAQIPKIREVVQAMGIPVVDYPGFEADDVMATVARLCEEGGAR
CLLVTADKDCRQLLTSQTAIYNIRKDLEYGATELYGDWGIAPEQVVDFQSLVGDKIDNVP
GVPLIGPKIAKELLEKYGSLENVLDHAGELGGKRSQNLIEHREAALLSRKLVELDKNVPI
AIDWSSARIGGFDEARLADLFRDYGFRGLAERVMAVAGANTVKTPGQLIPAVSDWDGDYQ
VVDTPEALAVLISQMEQQEQLSIDTETTAISPRIAEVVGYSFAWRPGQAFYVPVRGPEGD
RVLDPAETAAALKPIFENPAIAKIGQNIKYDIIVLRTVGIELRGVAFDTMVADYLIDSGE
RTHNLDHLSLKYLGHETIRIGEIIGSGKNQLRMDQAPVAAVGEYAAEDADVPLRLMPLLV
DRLSADNLAELNETIEVPLIDVLADLEYLGVSVDVARLKELSVEYGERLQQLKIEIEELA
SRPLNIDSPKQLAELLFTDLKLPVIKKTKTGASTDASVLEELAPLHPLPAKIVEYRQYSK
LLGTYIDALPELVNPATGRVHASLNQVVAATGRLSSSNPNLQNIPIRTREGREIRSAFKA
GEPGWVLLAADYSQIELRVLAHYCGDPSLRQAFENDEDIHRLVASQVNGVSMDEVTNEMR
RGAKAVNFGIIYGQSPFGLAKGLGISKEEASDFIEKYFATYPGVMDYLIDTLTLCREQGY
VTTLFNRRRAIDGVRPVPPGLREKSGALRFLNVPERTAVNAVIQGTAADLIKVAMIRIQD
RLKQEKLPGRMLLQIHDELLFETPPEAAAELAALVRQEMSTVAELAVPLKVDVKVGPNWA
ACEAWEE
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagagctcgccaaacgacgttcccgggcatggacgaaccggaaccgcagccc
gccgccaaagcgagtcgcgccgctgcggggttggtggtaaaccacgccgccgcgccagcc
gaggattcgacgccagccggccctctcgccatctgcgattggacgatttatgtcgtcgac
tcctactcgctgattttccaggtcttccacgcgatgtcgggctcggagctaaccagcccc
cgcggcgaaccggtcggcgccgtctatggcttcacccgcgatctggtccagctgatggag
cggaagcagccgacggctctcctctgcgcgtttgacctctcggggccgacatttcgtcac
gaaatgtacgactcctacaaagccgaccgcagcgagatgcccgaatcgctctcggctcag
atcccgaaaatccgcgaagtcgtccaggcgatgggcatcccggtggtcgactaccccggc
ttcgaggccgacgacgtgatggccaccgttgcccgcctgtgcgaagaagggggggcccgc
tgcctgctcgttacggccgataaggactgccggcaactcctcaccagccaaaccgcgatc
tacaacatccgcaaagacctcgaatacggcgccaccgaactctacggtgattggggcatc
gcccccgaacaggtcgtcgacttccagtcactcgtgggcgacaaaatcgacaacgtcccc
ggcgtcccgctcatcgggccgaagatcgccaaggaactgctcgaaaagtacggctcgctc
gaaaacgtcctcgatcacgccggcgaacttggcggcaagcggagccagaacctcatcgag
catcgcgaagccgcgctcctctcgcgcaagctggtcgaactcgacaagaacgtgccgatt
gccatcgactggagctcggcccgcatcggcggcttcgacgaagcgcggctcgccgacctc
ttccgcgactacggcttccggggcctcgccgagcgggtgatggctgtcgccggcgcgaac
accgtgaagacgccgggccagttgattcccgcagtcagcgactgggacggcgactatcag
gtcgtcgacacccccgaagcgctcgcggtgctcatcagccagatggagcagcaggagcag
ctctcaatcgacaccgaaacgaccgcgatctcgccgcgaatcgccgaggtcgtcggttat
tcgttcgcgtggcggccagggcaggcgttttatgtaccggtgcggggccccgagggcgac
cgcgtcctcgaccctgcggagaccgccgccgccctgaaaccgatcttcgaaaaccccgcg
atcgcgaagatcggccagaacatcaagtacgacatcatcgtgctccgcacggttgggatc
gaactgcgcggcgtcgccttcgacacgatggtcgccgactatctgatcgactcgggcgag
cggacgcacaacctcgaccacctctcgctcaagtacctcggtcacgaaacgatccgcatc
ggcgagatcatcggctcgggcaagaaccagctccgcatggatcaggcccccgtcgccgcc
gtcggcgaatatgcggccgaagacgccgacgtgccgctgcggctgatgccgctccttgtc
gaccgcctctccgcggacaacctcgccgagctcaacgaaacgatcgaagtcccgctgatc
gatgtcctcgccgacctcgagtacctcggcgtcagcgtcgacgtcgctcggctgaaggaa
ctgagcgtcgaatacggcgagcggctgcagcagctaaagatcgagatcgaagaactcgcc
agccggccgctgaacatcgactcgcccaaacagctcgccgagctgctatttaccgacctg
aagctgccggtcatcaaaaagacgaaaaccggcgcgagcaccgacgccagtgtgctggaa
gaacttgccccgctccacccgctgccggccaagattgtcgagtaccgccaatactcaaaa
ctgctcggcacctacatcgatgccctgccggaactggtgaatcccgccaccggccgcgtc
cacgcctcgctcaaccaggtcgtcgccgccaccggccggctcagttccagcaacccgaac
ttgcaaaacatccccatccgcacccgcgaaggccgtgaaatccgctcggcgttcaaagcg
ggagaaccgggctgggtgctgctcgccgccgactattcgcaaatcgagctccgcgtcctc
gcccactactgcggcgaccccagcctgcggcaggcgttcgaaaacgacgaagacatccat
cgcctcgtcgccagccaagtaaacggcgtgtcgatggacgaggtgaccaacgaaatgcgt
cgcggcgccaaggcggtcaacttcggcatcatctacggccaaagcccgttcggcttagcg
aagggactcggcatctccaaggaagaggcgtccgacttcatcgagaagtacttcgccacc
tacccgggcgtgatggattacctgatcgacacgctcaccctctgccgcgagcaaggatac
gtcaccacgctgttcaaccgccgccgcgcgatcgacggcgtccgccccgtgccgccgggg
ctgcgcgaaaagtcgggcgccctccgcttcctcaacgtgcccgaacgaaccgcggtgaac
gccgtcatccagggaaccgccgccgatctcatcaaggtcgcgatgatccgcatccaagac
cgcctcaagcaagaaaagttgcccggccggatgctgctgcaaatccacgacgaactacta
ttcgaaacgccgcccgaagctgccgcggaactcgccgcgctcgtccggcaagaaatgtcg
accgtcgccgagctcgccgtgccactaaaggtcgacgtgaaagtcggccccaactgggca
gcatgcgaagcctgggaagaatga
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