Lacipirellula parvula: PLANPX_3966 Help Entry PLANPX_3966       CDS       T06590                                  Name (GenBank) RNA-2',3'-PO4:RNA-5'-OH ligase   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism lpav  Lacipirellula parvula Brite KEGG Orthology (KO) [BR:lpav00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:lpav03016]     PLANPX_3966 Enzymes [BR:lpav01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      PLANPX_3966 Transfer RNA biogenesis [BR:lpav03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     PLANPX_3966  Prokaryotic type    tRNA splicing ligases     PLANPX_3966 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RtcB Motif Other DBs NCBI-ProteinID:  BBO34354 UniProt:  A0A5K7XC02 LinkDB All DBs Position complement(4417322..4418839) Genome browser AA seq 505 aa AA seqDB search MSIATDNDSPSAPSKFQMIADGDATAILPTGGKQKPITVIGTEAIRATFDDLCLQQAINS RLAPGVTDLVLNPDAHCGYGAPVGCVMVSPTHIYPGPVGVDIKCSMSLLQTSLPADAILD RPTRRALINAICERTPTGAGRGQRNAPKSRHVSEALGKRVMVEGASRGVCEELGIPPEWA ARCEDSAHVGHDDSTGALALRLEQLMPQMHRFDAKMTQLGSYGGGNHFGECEVVHVEAND RAREAARVFGLVDGGVAFLSHCGSRGIGHQLASGQFKALQGKFAQWDIPLPGGDRELVYA PLGTPEADAYIDDMALGANFATVNHLLINALVLEAFQEVLPGVTGQLVYFISHNIARKEV VNNGIAWVHRKGATRAFPAGHHSLRDTPFAGTGHPILLPGNPQAGSVVMAADAGASVSCY SVNHGAGRQLGRKAAKRALDQKEVDRSFDEADILTNCRAYPIDEAPAAYKDFDEVLRSVK SAGLASEVARLKAKFVVKDGDQADD NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgagcatcgccactgacaacgattcgccctcggcgccgagcaagttccagatgatcgcc gatggcgatgcgaccgccattctaccgaccggcggaaagcagaagccgatcaccgtcatc ggcaccgaggcgattcgcgccaccttcgacgacctctgcctgcagcaggcgatcaactcg cggctggcgcctggcgttaccgatctggtgctgaaccccgacgcccattgcggctacggg gcgccggtcggctgcgtcatggtttcgccgacccacatctatcccggcccggttggcgtc gacatcaagtgttcgatgagcctgctgcaaaccagcctgccggccgacgcgattctcgac cggccgacgcgtcgcgctctcatcaacgcgatctgcgaacggacgcccaccggcgccggt cgcggtcagcggaatgccccgaagtcgcgccacgtcagcgaagcccttggcaaacgcgtc atggtggaaggagcttcgcgcggcgtgtgcgaagaactcggcatcccgccagagtgggcg gcgcgctgcgaagattccgcgcacgtgggccacgacgactcgaccggcgccctggcgtta cggctcgagcaactgatgccgcaaatgcaccgcttcgacgcaaagatgacgcaacttggc tcctacggcgggggcaaccattttggcgaatgcgaagtcgtgcatgtcgaagcaaacgat cgtgcgcgcgaagcggcgcgggtcttcgggctcgtcgacggcggcgtcgcgttcctgtcg cactgcggttcgcgcggcatcggccaccagttggcgtcggggcagttcaaggccctgcaa ggcaagttcgcccagtgggatatccccctcccgggcggcgaccgcgaacttgtttacgcc ccgctcggcacgcctgaggccgacgcctatatcgacgacatggcgctcggcgccaacttt gcgaccgtcaatcacctgctgatcaacgcgctggtgctggaagcgttccaagaagtgttg ccgggcgtcaccggccagctggtctatttcatcagccacaacatcgcgcggaaggaagtg gtgaacaacggcatcgcgtgggtccaccgcaagggagcgacgcgggccttcccggccggg catcactcgctgcgcgatacgccgttcgccgggacggggcacccgattttgctgcctggc aatccgcaggcgggttcggtcgtgatggccgccgacgcgggagcctcggtgagttgctac agcgtcaaccatggcgccggccggcaactaggtcgcaaggcggcgaagcgtgcgcttgac caaaaagaagtcgaccgctcgttcgacgaggccgacatcctcacgaattgccgggcgtac ccgatcgacgaagcgcctgcagcgtacaaagattttgacgaggtgctgcgttcagtgaag agcgcggggctggcgagcgaagtggcgcggttgaaggcgaagtttgtcgtcaaggatgga gatcaggcggatgactag

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