Lacipirellula parvula: PLANPX_3968
Help
Entry
PLANPX_3968 CDS
T06590
Name
(GenBank) transcriptional regulatory protein RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
lpav
Lacipirellula parvula
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lpav03000
]
PLANPX_3968
Transcription factors [BR:
lpav03000
]
Prokaryotic type
Other transcription factors
Others
PLANPX_3968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA_16
AAA
AAA_19
AAA_22
AAA_30
T2SSE
AAA_33
ATPase_2
NACHT
bpMoxR
MCM
AAA_7
AAA_14
NTPase_1
AAA_29
AAA_2
TniB
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BBO34356
UniProt:
A0A5K7XJ07
LinkDB
All DBs
Position
4421510..4423090
Genome browser
AA seq
526 aa
AA seq
DB search
MKQVAIGLLGSRLDQSIEDANRWQTWRPSVAICQHEDFLIDRFELIYDAAVSRLANSVAD
DIRSVSPETEVRLHELTFQDPWDFEEVYGGLHAFASSYTFRPESERYLVNITTGTHVQQI
CLFLLAESGHIPGQLLQASPPRRQQEGQGTYRIIDLDLSRYDQLAARFALEQQESLSFLK
SGIQTRNAAFNALIEQIERVAIHSRAPLLITGPTGAGKSQLARRVFELKQQRRQLAGRFV
EVNCATLRGDQAMSALFGHEKGAYTGATAKRDGLLRAADGGMLFLDEIGELGLDEQAMLL
RAIEEKRFLAVGADREVASDFQLIAGTNRDLQRAVNEGRFREDLLARINLWTFCLPGLAE
RREDIAPNLEYELTQYSAKTGQVVRMNKEATQRFLQFAETDAATWRANFRDLNAAVTRMA
TLAAGGRISTDLVEEEIRRLQTQWQPCVVGPNDRSLPELVDASQLDDFDRVQLEEVVRVC
RQSKTISDAGRKLFAVSRNLKAKPNDADRLRKYLARFELTWELLHR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagtcgccattggcctcctgggctcccgactcgaccagagcatcgaagacgca
aaccgctggcaaacctggcggccctcagtcgcgatctgccaacacgaagatttcttgatc
gaccgatttgagctgatctacgacgccgcggtgtcgcggttggccaatagcgtcgccgac
gacatccggtcggtttccccggagacggaggtgaggcttcacgaactcaccttccaagat
ccgtgggatttcgaggaggtgtacggcggcctgcatgcgttcgcgagcagctacacgttt
cgcccggagtcggagcgctatctcgtcaacatcacaacgggcacccacgttcagcagata
tgtctcttcttgcttgcggaatcagggcatatcccagggcagttgctgcaggcctcgccg
ccgcgacgccaacaggaagggcaggggacctatcggatcatcgatctcgatctgtcgcgc
tacgatcaactcgcggcgagattcgcgctggaacagcaggagagcctgtcgttcctgaag
tcaggaattcaaacgcgcaacgcagcgttcaacgcgctcatcgaacagattgaacgcgta
gccatccacagtcgagcgccgctgttgatcacggggcctactggcgccgggaagagccag
cttgcccgccgcgttttcgaacttaagcaacagcgccggcagctggccggacgcttcgtg
gaggtgaactgcgccaccttacgcggcgatcaggcgatgtcggcgctgttcggccatgag
aagggcgcctacaccggcgcaacagccaagcgagacggcttgctccgcgccgccgacggc
ggcatgctctttctcgacgaaatcggcgagctcgggctggacgaacaggcgatgctgttg
cgcgccatcgaagagaagcgattcctcgccgtcggcgccgaccgcgaggttgccagcgat
tttcaattgattgccggcacgaatcgcgacttgcagcgtgcagtgaatgaaggccgattc
cgcgaggatttgttggcgagaatcaacctttggacattttgcctgccgggcctggctgag
cgtcgcgaggatatcgcccccaacttggagtacgagttgacgcagtactcggcaaagacg
gggcaagtcgtgcggatgaacaaagaggcgacgcaacggttcctccaattcgcggagacg
gacgccgcgacgtggcgagccaatttccgcgacctcaacgccgccgtaacgcgcatggcg
accctcgccgctggcggacgcatttcaactgatctcgttgaagaagaaattcgacgcctg
cagacgcaatggcagccctgcgtcgtcggcccgaacgatcgctcgctgccggagttggtc
gacgcgagtcagctggacgatttcgaccgcgtgcaactagaggaagtggtgcgggtatgc
cggcaaagcaagacgatctccgacgctggccggaagttgttcgcagtctcaagaaatttg
aaagcgaaacccaacgacgccgatcggctgcgaaaatacttggcccggttcgaattaacc
tgggaattactgcatcgctaa
DBGET
integrated database retrieval system
