Lacipirellula parvula: PLANPX_4544
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Entry
PLANPX_4544 CDS
T06590
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav03030
DNA replication
lpav03430
Mismatch repair
lpav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PLANPX_4544
03430 Mismatch repair
PLANPX_4544
03440 Homologous recombination
PLANPX_4544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpav03032
]
PLANPX_4544
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_4544
Enzymes [BR:
lpav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PLANPX_4544
DNA replication proteins [BR:
lpav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PLANPX_4544
DNA repair and recombination proteins [BR:
lpav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PLANPX_4544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
BBO34932
UniProt:
A0A5K7XFZ4
LinkDB
All DBs
Position
complement(5074630..5075721)
Genome browser
AA seq
363 aa
AA seq
DB search
MAKKSAATLSGFDVLTDPKSVTVPGVVAIVGDDGFLQHEVRRALVAQLCGDDPDAAAEHL
DGSEIEYRDLHDALSELSLFGSGRRVIVVEEADDLVKHYRDRLEDYVAKPRSDAILILEV
TTWPSNTRLAKAVAESGLTIRCATPAQGRELTEFTKQLKDWLVVVARREYKCELVRAAAD
QLLEQIPPEPGILYQEIARLSLLAEPSRKIDVKLVQENVGGWRARKTWDMIDAAAEGRAA
DALQQLDRLFAAGEEAHALLPQMASTLRKFALAVRLFDQAERRRQAISIRIALERAGMPP
FKLNDAERQLKQIGRPRARQLYRWLLAADLELKGYNSTKDRARRVIETLIIRLSQHAAPV
AGR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaagtccgccgccacgctctcgggattcgacgtcctcaccgaccccaagtcg
gtgaccgttcccggcgtggtggcgatcgtcggcgacgacggcttcctccagcacgaagtc
cgccgcgcgctcgtcgcccaactttgcggcgacgatcccgacgcggcggccgagcatctc
gacggcagcgagatcgagtaccgcgacctccacgacgccctgtcggaactgtcgctcttc
ggcagcggtcgtcgggtgatcgtcgtcgaagaagccgacgaccttgtgaagcactaccgc
gaccggctcgaagattacgtcgctaagccgcgcagcgatgcgatcctcatcctcgaagtc
actacctggccaagcaacacgcggctggccaaagcagtcgccgagtcggggctcacgatt
cgctgcgccacccccgcgcagggaagagagctcaccgagttcacgaagcagctgaaggat
tggctcgtcgtcgtcgcccgtcgcgaatataagtgcgagctcgtccgcgccgcggccgac
cagttgctcgaacaaatcccgccagagcccggcattctctaccaggagattgcccgcctc
tcgctgctggccgagccgagccgcaagatcgatgtgaagctggtgcaagagaacgtcggc
ggctggcgggcacgcaagacgtgggacatgatcgacgccgctgctgaaggccgcgcggcc
gacgcgctgcagcaactcgaccggttgttcgccgccggcgaagaagcccacgctttgctg
ccgcaaatggcgtcgacgcttcgcaagtttgccctcgcagtgcggctgttcgatcaggcc
gagcgtcgccgccaggcgatttcgattcgcatcgcgctcgaacgggccggcatgcccccg
ttcaaactgaacgacgccgagcggcagctcaagcaaatcggccgcccgcgcgctcgccag
ctctaccgctggttgctagcagccgacctggagctgaaaggttacaactcgacgaaagat
cgggcccgccgggtgatcgaaacgctcatcatccgcctctcgcagcacgccgcccccgtt
gccggccgctag
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