Lacipirellula parvula: PLANPX_4583
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Entry
PLANPX_4583 CDS
T06590
Name
(GenBank) 3'-to-5' oligoribonuclease A
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav00920
Sulfur metabolism
lpav01100
Metabolic pathways
lpav01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
PLANPX_4583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_4583
Enzymes [BR:
lpav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
PLANPX_4583
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
PLANPX_4583
DNA repair and recombination proteins [BR:
lpav03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
PLANPX_4583
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RSD-2
Motif
Other DBs
NCBI-ProteinID:
BBO34971
UniProt:
A0A5K7XIZ5
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Position
complement(5116607..5117605)
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AA seq
332 aa
AA seq
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MKIDWQPLVEIIQSHERFLLTSHQRADCDAVGSEMALALILETLGKQVAIVNSDAVPEHI
AFMDPYGRVAVIGASAPLEAMRAFEVMIVVDTSAWGQLGGMAEVLRSFKGVKAVIDHHAS
EDDLGAIVFKDSTAEATGRLILQLAKELGVPITPEIAAPLFAAIATDTGWFRFPSVTADT
FAALAKLTAAGASPAKTFAVLYEQHSLPRLHLRGRILEQVTPECDGRMMWTQVSAADFRE
TGAQKTDTEDVINMLLTVKGVEIAVLFVELEPTLTKVSLRSRSGFDVNQLAAQFGGGGHK
AAAGISFPGAMADAQQAVLAALRNGLEQSPQN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgattggcagccgctggtggagattattcaatcgcatgagcgattcttgctg
acgagccatcagcgcgccgattgcgatgcggttggcagcgagatggctcttgcgctcatt
ttggaaacgctcggcaagcaggtggcgatcgtcaattcggatgctgtgccggagcacatc
gcgttcatggatccgtacggccgcgtggcggtgatcggcgcgtcggcgccgctcgaagcg
atgcgggcgtttgaggtgatgatcgtcgtcgacacgagcgcctgggggcagctcggcggc
atggccgaagtactgcggagctttaagggcgtgaaggcggtcatcgatcatcatgcgagc
gaagacgacctcggcgccatcgtgttcaaggacagcaccgccgaagcaacggggcggctc
attctgcagctggcgaaagaactcggcgtgccgatcacgccagagattgcggcgccactg
ttcgccgcgatcgcgaccgacactggttggttcaggttcccatcggtgacggccgatacg
ttcgcggcgctcgccaagctgacggcggcgggagcgagcccggcgaagacgttcgcggtg
ctttacgagcagcacagcctgccgcggctccacctgcgcgggcgaattctcgagcaggtc
acgcccgagtgcgatgggcgaatgatgtggacgcaagtttcggccgccgacttccgtgag
acgggcgcccagaagactgacaccgaagatgtgattaacatgctcctcacggtgaagggc
gtcgaaatcgcggtattgttcgttgaacttgagccgacgctgacgaaggtgagtttgcgg
agccgcagcgggttcgacgtcaatcaactcgcggctcagttcggcggcggcgggcacaaa
gcggcggcagggatcagctttcccggcgcgatggccgacgcgcagcaggcggtattggcc
gcgttacggaatggattggaacaaagtccgcagaattag
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