Lacipirellula parvula: PLANPX_4589
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Entry
PLANPX_4589 CDS
T06590
Name
(GenBank) protein translocase subunit SecD / Protein translocase subunit SecF
KO
K12257
SecD/SecF fusion protein
Organism
lpav
Lacipirellula parvula
Pathway
lpav02024
Quorum sensing
lpav03060
Protein export
lpav03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PLANPX_4589
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PLANPX_4589
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PLANPX_4589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lpav02044
]
PLANPX_4589
Secretion system [BR:
lpav02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PLANPX_4589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
MMPL
SecD_1st
ACR_tran
Sec_GG
Ribosomal_L9_C
Motif
Other DBs
NCBI-ProteinID:
BBO34977
UniProt:
A0A5K7XFZ6
LinkDB
All DBs
Position
5122837..5126307
Genome browser
AA seq
1156 aa
AA seq
DB search
MEFESLVRRSSPAMKAFRGLLAAAVVLSSTWLASPCFAQAAPSGTPATAAAPADAPVEGG
VSMIALRNIGIIIALFVVPIIIGNMLAKSLRMPDYAWKFAVAIGVLAAAGVVVALGEIKL
GPDLSGGITLIYEVEKREGAAAEPAAKTDDAAAEDEKDVAVDDTERDDAELEAEGAEEVA
EEKQAATGGQTYGNVSRSDTMAALIKALIERVDPAGTKEVSIKRFGDDQIEIIIPKAEKA
ELEAIERRIYTAGVLEFRITASRQFDQHRAIIDLAERMPANQNIVRVDGKEVARWVEFDE
KQFGTPEQAGRALVVRTNSKTPQALIMTNDGWDVTGEYLRNAAGDIDQSGRPAVSFTFNS
QGARRFERLTRAHQPAPSGAKYQLGILLDSRLLSAPNLNAVISDRGIIEGLDDQGEVDFL
VGILNAGSLPAALNKVPISRAQISPTLGQLTIEKGKNSLLISLVLVAIFMVIYYKKAGFI
SWLGLAANMLLILGSMVLIKAAFTLPGLAGLVLTVGMSLDANVLIYERIRDELKKGTALR
MAIRNGFDRASITIIDSNVTNLITGVVIYKIAPDSVKGFGVTLVLGIVMSVFTAVFLTRI
VFDVAERRGWLKNMSMREFIGETNFDFVGWRLPSIIASLVVIGIGLFAVAKRGQDLFDID
FTGGSSVTIVFEDDKPTPYAEVYETLQTTPLGEENLSLVEMGDDDTRYTVTTINDDVVEV
ENILKDAFGDKLKKYQVNVEEVKEFAPGEQTSLLPAVKPLDLVRGLKFASPLSYVTLLQP
AETEEATPPAENESVTAAPEGEAAEEAKPAEEAAPAAETPAAEPAAEPAAETPAPATETP
AATTTPATPAAPAAADVEANPFAGGATAKLKFAADKDGDASGVSHDTLDQMIGDALKKAG
KGEVVYEITNEDYREGSNRAMEEWQVSIALPPAEAKAIFDQIAAETNAKPIFPLSSKIGG
RVAGQMATSAAAAMILCLVGIIAYVWFRFHGVIYGIAAVIALIHDVLVTLGFVALSAYFV
NGAEGVASLFLVDKFQINLVLVAAFLTIIGYSLNDTIVIFDRIREVKGKSPRLTKEIINL
SVNQTLARTILTSFTTLTSVVVLYIFGGDGIHAFAFALLVGFIAGCYSTIFIANPVLLWL
AERFESGPAPSTTAKS
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgagtccctcgtccgtcgctcgtcaccagccatgaaggcgtttcgcgggctg
ctcgccgcggcagtcgttctctcatcgacgtggctcgcctcgccctgcttcgcgcaagcg
gcccccagcggcacgccggcgacggccgcagcccctgccgacgcccccgtcgaaggcggc
gtcagcatgatcgccctgcggaacatcgggatcatcatcgcgctgttcgtcgtgccgatc
atcatcggcaacatgctggccaagtcgctgcgcatgcccgactacgcctggaagtttgcg
gtggcaatcggcgtgctggccgcggcgggcgtcgtcgtcgcgctcggtgaaatcaagctc
ggtcccgacttgagcggcggtatcacgctgatttacgaagtcgagaagcgcgaaggagct
gccgcagagccagcggcgaagaccgacgacgctgctgcagaagacgagaaggacgtcgcc
gtcgacgacaccgaacgcgacgacgcggaactcgaagccgaaggcgccgaggaagtcgct
gaagaaaagcaggccgccacgggcgggcaaacctacggcaacgtgagccgtagcgacacg
atggccgcgctaatcaaggcgctcatcgagcgcgtcgatcccgccggtacgaaggaagtc
tcgatcaagcggttcggcgacgaccaaatcgaaatcatcattccgaaggccgagaaggcc
gagctcgaagcgatcgaacgccgcatctacacggcgggcgtgctcgagttccgcatcacc
gcctcgcggcagttcgatcagcaccgggcgatcatcgatctcgccgagcgtatgccggcg
aaccaaaacatcgtccgcgtcgacggcaaggaagtcgcccgctgggtggagttcgacgag
aagcagttcgggacgccagaacaagccggtcgcgcgctggtcgtacggacgaactcgaag
acgccgcaggccctcatcatgacgaacgacggctgggacgtcacgggcgagtacctccgc
aacgccgcgggcgacatcgatcagtcgggccgtccggcggtttcgttcaccttcaacagc
caaggggctcgtcggttcgagcgtctcacccgtgcccatcagccggcgccgtcgggagcc
aagtaccaactcggcatcttgctcgacagccgtctgctctcggctcctaacctgaacgcc
gtcatttccgaccgcggcatcatcgaagggctcgacgaccagggcgaagtcgacttcctg
gttggcattctcaatgccggcagcttgcccgccgcgctcaacaaggtgccgatcagccgc
gcgcaaatcagcccgacgctcggccagctgacgatcgagaagggcaagaattcgctgctc
atctcgctcgtgctcgtcgcgatcttcatggtcatttactacaagaaggcgggcttcatt
tcgtggctcggcctggcggcgaacatgctactgatcctcggcagcatggtgctcatcaaa
gcggccttcaccttgcccggtctcgccggcttggtgcttaccgtcggtatgtcgctcgac
gcgaacgtgctcatttacgaacgcatccgcgacgagctcaagaaggggacggcgctgcgg
atggcgattcgcaacggcttcgaccgggcgagcatcacgatcatcgactcgaacgtgacg
aacctgatcaccggcgtcgtcatctacaagatcgcccccgacagtgtgaagggcttcggc
gtcacgctcgtcctcggcatcgtgatgagcgtgttcacggcggtgttcctcacccgcatc
gtgttcgacgtcgccgaacgccgcggctggctcaagaacatgagcatgcgggaattcatc
ggcgaaacgaatttcgacttcgtcggctggcgcctgccgagcatcatcgcctcgctggtg
gtcatcggcatcggcctgttcgccgtcgccaagcgcgggcaagacttgttcgacatcgac
ttcaccggcggcagttcggtgacgatcgtgttcgaagacgacaagccgacgccttacgcc
gaagtctatgaaacgttgcaaacgaccccgctcggcgaagagaacctctcgctcgtcgag
atgggcgacgacgacacacgctacaccgtgacgacgatcaacgacgacgtcgtcgaggtc
gagaacattctgaaggacgcgttcggcgacaagctgaagaagtaccaagtcaacgtcgaa
gaggtgaaggaattcgccccgggcgagcagacctcgctgctgccggccgtgaaaccgctc
gacctggtgcgcggcctcaagttcgcttccccgctgtcgtacgtcacgctgcttcaaccg
gcggagaccgaagaagcgacgccgcccgccgaaaatgaatccgtgaccgccgcgccggaa
ggcgaagctgcggaagaggccaagccggccgaggaagccgctccagcggcggaaactccc
gccgcggaaccggctgctgaaccagccgccgaaacgccggcgcccgccacggaaacgccg
gcagcgacgacgactcccgcaacgcctgcagcacccgctgccgccgacgtggaagccaat
ccctttgccggcggcgccaccgccaagctgaagttcgccgccgataaggatggcgacgcc
tctggcgtgagccacgacacgcttgatcagatgatcggcgacgccttaaagaaagcaggc
aaaggcgaagtcgtctacgagattaccaacgaggactatcgcgagggcagcaaccgcgcg
atggaagagtggcaagtctccatcgccttgccgccggcggaagcgaaggcgatcttcgat
cagatcgcggctgaaaccaacgcgaagccgatcttcccgctctccagcaagatcggcggc
cgcgtcgccggtcagatggccacctccgcggccgcggcgatgatcctctgcctcgtcggc
atcatcgcctacgtttggttccggttccacggcgtgatctacggcatcgccgcggtgatc
gcgctcatccacgacgtgctcgtcacgctcggcttcgtcgccttgtcggcgtacttcgtc
aacggcgccgagggcgtggcgtcgctgttcctggtcgacaagttccagatcaacctggtg
ctcgtcgccgcgttcctgacgatcattggctactcgctcaacgatacgatcgttattttc
gaccggatccgcgaagtgaaggggaagagcccgcgactgacgaaggagattatcaatctc
tcggtcaaccaaacgttggcgcggacgattctgacctcgttcaccaccctgacgagcgtc
gtcgtgctgtacatcttcggcggcgacggcattcacgccttcgccttcgcgttgctcgtc
ggcttcatcgccggctgctacagcacgatcttcatcgccaacccggtgctgctgtggctg
gccgagcggttcgaaagcggcccggcgccgagcaccacggcgaagagctaa
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