Lacipirellula parvula: PLANPX_5080
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Entry
PLANPX_5080 CDS
T06590
Name
(GenBank) transcription termination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
lpav
Lacipirellula parvula
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpav03021
]
PLANPX_5080
03009 Ribosome biogenesis [BR:
lpav03009
]
PLANPX_5080
Transcription machinery [BR:
lpav03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PLANPX_5080
Ribosome biogenesis [BR:
lpav03009
]
Prokaryotic type
rRNA transcription factors
PLANPX_5080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_NusA_C
S1
HHH_5
KH_1
KH_2
Motif
Other DBs
NCBI-ProteinID:
BBO35468
UniProt:
A0A5K7XG20
LinkDB
All DBs
Position
5673226..5674563
Genome browser
AA seq
445 aa
AA seq
DB search
MNPNEILRIVDAIHRDKNIGKEIVFEGIEAALVSALKKHYGEEADITVTIDRQSGNVSAV
CDGEALPSEEVVGRIGAQTAKQVMIQKIREAERDALFDEYTEQIGDMVSGVIHRYEGAAA
TVALPNVEAILPRSEQIPGETHHVNERVRATVFEVRKSGSRVKVILSRTRPQLVQRLFEQ
EIPEIIDGVIEVRAMAREPGYRSKVAVSSSDARVDCVGACVGVRGNRIKNIVDELGGERI
DIVRWDDNLEVLIPNALQPAEVEQVILCKMLGRAIVLVREDQLSLAIGRRGQNVRLASKL
SGWDIEIMTQDELAESIDRAVTGFSQLDGMSIELAERLVEEGFLSYDDLSVIEPDALMAM
GEMSEEEVDTIVSQAEDKAMEAEAAAQEARRKKREEDRIAAIEAEHVAADIAAGRLPTAP
TAPVDGGESEALAEEVAEESEGSAP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccaacgaaatcctccgcatcgtcgatgcgatccatcgcgacaagaacatcggc
aaagagatcgtgttcgaggggatcgaggctgcgctcgtctcagcgctgaagaaacactac
ggcgaagaggccgacatcaccgtcacgatcgatcgccagtcgggcaacgtctcggccgtc
tgcgacggcgaagcgctcccctccgaggaagtcgtcggccgtattggcgcccagaccgct
aagcaggtgatgattcagaagattcgcgaagcggagcgcgacgctctgttcgacgaatac
accgaacaaatcggcgacatggtcagcggcgtcatccaccgctacgaaggcgccgccgcg
acggtcgccttgccgaacgtcgaagccatcctgccgcgcagcgagcagatccccggcgaa
acgcatcatgtgaacgaacgcgtccgcgcgacggtgttcgaagttcgcaagagcggcagc
cgcgtgaaggtaatcctcagccgcacccgcccgcagttggtgcagcggctgttcgagcaa
gaaatcccggaaatcatcgacggcgtcatcgaagttcgcgccatggctcgcgagcccggc
taccgctcgaaggtggccgtcagctcgagcgacgcccgcgtcgattgcgtcggcgcctgc
gtcggcgttcgcggcaaccgcatcaagaacatcgtcgacgagctcggcggcgagcggatc
gacatcgtccgctgggacgacaacctggaagtcctcattccgaacgccctacagccggcc
gaagtcgagcaggtgattctctgcaagatgctcggtcgtgcgatcgtgctggtccgcgag
gatcagctgtcgctggcgattggccgtcgcgggcagaacgttcgcctagcgagcaagctg
tcgggctgggacatcgaaatcatgacccaggacgaactggccgaatcgatcgaccgggcc
gtcaccgggttcagccagctcgacggcatgagcatcgagttggccgagcggctcgtggaa
gaaggcttcctgagctacgacgacttgtcggtcatcgagccggacgcgctcatggcgatg
ggcgagatgagcgaagaagaagtcgacacgattgtttcccaggcggaggacaaggcgatg
gaagccgaagccgccgcccaggaagcgcgtcgcaagaagcgtgaagaagatcggatcgcg
gccattgaagcggaacatgtggccgccgacattgccgctggtcgcttgccgacggcgccg
accgctccggtcgacggcggcgagagcgaagcattggcggaagaagttgctgaagaaagc
gaaggttcggcgccatga
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