Lacipirellula parvula: PLANPX_5091
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Entry
PLANPX_5091 CDS
T06590
Name
(GenBank) 3'->5' exoribonuclease Bsu YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lpav
Lacipirellula parvula
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpav03019
]
PLANPX_5091
Messenger RNA biogenesis [BR:
lpav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PLANPX_5091
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BBO35479
UniProt:
A0A5K7XPU3
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All DBs
Position
5686497..5687465
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AA seq
322 aa
AA seq
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MPDRRFVSQLAHNEPVQQVFLASEKLLRPNKNGNLYLQVDLSDRSGSINTRMWNASEDDY
KAFENGDFVVVDGATQLFQGNMQLIANRIRRARPDEVCEADFMTLQSADVDRMRARLVEI
LGKIQTPPLQRLVKAFTDDSVFMDKFCIAPAGMKNHHGYKSGLLEHVVSLLELVLVVAPR
YPQLDQDKLLVGAFLHDAAKVDELSYDRDISYTDEGQMLGHMIMGVTMVDDKVREAVRKD
GMPMPEKLITEIKHMIISHHGEYEYGSSKLPMTLEAVALHHLDNLDAKLASFTQLINDCP
NADSPWTQYFTQIGRKLYKGAM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcgtcgcttcgtcagccagctcgcccacaacgaaccggtccagcaggtcttt
ctcgcctccgagaagctgctgcggcccaacaagaacggcaacctctacctccaggtcgat
ctgagcgaccggagcgggtcgatcaatacccgcatgtggaatgccagcgaggacgactac
aaggcgttcgagaacggcgacttcgtggtcgtcgacggcgcgacgcagctgttccagggg
aacatgcagctaatcgccaaccgcatccgccgcgcgcggccggacgaagtttgcgaagcc
gacttcatgacgctgcagtcggccgacgtcgaccggatgcgcgcccgactggtcgagatc
ctcggcaagatccaaacgccgccgctgcagcgactggtgaaggcgttcaccgacgactcg
gttttcatggacaagttctgcatcgcccctgctggcatgaagaaccaccatggctacaag
agcggcctgctcgaacatgtcgtcagcctgctggagctcgtgctcgtcgtcgccccgcgc
tacccgcagctcgaccaagacaagctgctcgtcggcgccttcctccacgacgccgcgaag
gtcgacgagctgagctacgaccgcgacatctcctacaccgacgaaggccagatgctcggt
cacatgatcatgggcgtcacgatggtcgacgacaaagtccgcgaagccgttcgcaaggac
ggcatgccgatgccggagaagctgatcaccgagatcaagcacatgatcatcagccaccac
ggcgagtacgagtacggcagttcgaagctgccgatgacgcttgaagcggtggcgctccac
cacctcgacaacctcgacgcgaaactggcgagcttcacccaactgatcaacgactgcccg
aacgcggatagcccgtggacgcaatacttcacgcagattggacggaaactttacaaggga
gcgatgtga
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