Lacipirellula parvula: PLANPX_5582
Help
Entry
PLANPX_5582 CDS
T06590
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
lpav
Lacipirellula parvula
Pathway
lpav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PLANPX_5582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Med3
ChitinaseA_N
CopC
K319L-like_PKD
FctA
Cadherin
Motif
Other DBs
NCBI-ProteinID:
BBO35970
UniProt:
A0A5K7XGJ0
LinkDB
All DBs
Position
complement(6217232..6222691)
Genome browser
AA seq
1819 aa
AA seq
DB search
MLDAAAPALALETVAVGAAFTPSSDEAAAAAPPVASLNGNTAPSNINIQTPIVINENGVA
TLSLTFVDPDASDTHTIFVDWKDGSTQTFNLAAGQTSFLTTHQYLDDNLPGPATEDYDVL
VRVTDSAGEFSEVTSKITVNNVAPSNLQLAPITPVNENGVATLKLTFDDPGSKDTHTVEV
NWGDGSAVQVYNVPTGDRSFTATHQYLDDNPTATPSDTYTVSVRLVDDDLGVTTATTTAT
VNNVAPSNVKVTPVASILAEGGQASLKLTFDDPGSQDTHQVEINWGDGNTTVTTAVGHSL
NVNHTYGDNATYAIIVKVIDDDGGVGVGSAAALVSNVPPSNVKIDPIATIDENGVAVLKL
TFDDPGTLDSHTVDVDWGDGTIETIAVAAGSRTLTATHQYLDDNPTGTSSDVYAVKVTVR
DDDGGQATGNATVQVVNVPPSNVKVTPVANIVNEGSQVALTVTFDDAGSQDTHQVEINWG
DGNTTVTSAVGHSLNVNHAYGDNGTYAINVKVIDDDGGVGFGSAAALVNNVPPSNVKIDP
IAAINENGVATLTLTFDDPGTLDSHTVDIDWGDGTIETVAVTAGSRTLTATHQYLDDNPT
GTSSDIYTVKATVRDDDGGQAVGNATVQVANVPPSNVKIDPIAAINENGVATLKLTFDDP
GSLDSHTVDIDWGDGTVETVVVAAGSRTLTATHQYLDDNPTATSSDIYTVKATVRDDDGG
QAIGNATVQVANVPPSNVKIDPIAAINENGVATLTLTFDDPGTLDSHTVDIDWGDGTVET
VAVAAGSRTLTATHQYIDDNPTDTSSDVYTVTATVRDDDGGQAVGNATVQVNNSAPSNVQ
VTPVANIVDEGSQVALTVTFDDSGSQDTHQVEINWGDGNVTIASATGHTLNATHAYGDNG
TYAITVKVTDDDGGVGFGSAAALVNNVPPSSVKIDPIAAINENGVATLTLTFDDPGSLDT
HTVEIDWGDGTIETVAVAAGSRTLTATHQYLDDNPTGTASDVYEVKATVRDDDGGQAVGN
ATVQVNNVAPGNVVAAPVASIITEGSQVNLGVTFDDVGSQDTHQVEITWGDGHVTVGTAT
GHAFSANHTYADNGVYAVYVKVIDDDGGVGEGSAAVHVNNVAPTLTVPGSQTVNEGGVLS
LPNIGQFTDPGFNNPLNAGNVLNGGETTEEFTYEINWGDGSANSTGAATIDQLGSPGAPT
AGSFDGTHVYADNGVYTVTVTVRDDDGGVTTSTFQVTVLNVDPSLKFQNPAIVVNEGTPI
TLGGIGVGVTDPGFDNGAQGTQETFHDATVDWGDGTGPQSLTINNRVSGSPGVATTADFV
STPHVYADNGTYTVTVRFRDDDGGFVDRTFTITVENVAPSLNLTNGVFVIDEGQTLNLPN
LGTFSDPGFNNPNNPNGASVESFYYTIDWGDGTTPQTGQLPASVTNGSPGTPTLGTLASS
HKYADNDADNKYTITVTLFDDDGGSVTKEIEVTVRNVNPTLKPIVATDVNNKGETTLTLQ
FTDPGADKFNVQVDWGDGTISTYPVDVAGNGQTQVFMHKYSGPPDPLNPTGDITLTVQVF
DDDFDTPGVVAIGASNIETVDISQPGLGAEKFRIDTSPQVAILTFPDRQVVPLLPTAAES
RLVTIITTDDGGGGGDTRAASERYLELCVINPDGTTGQRFRLPSNVLNNLPALFKNLPDN
HYVIYLVQSETNARRLVIDVFVRNGKLIDPGDDSEGARDRPPTEEATTQPAEEQPAAVPI
GDEGAAVEPPTQLEPLAGLGMRPRSSTAIYHGATLAGVAIALSGAGKSSYHQMEEAIARA
KPDQWKRLRSALTRPKKPR
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgccgccgccccggcgctcgcgctggagacggtggccgttggcgccgcgttc
acgccgtcgagcgacgaggccgctgccgccgcaccgccggtcgccagcctcaacggcaat
acagcgccgagcaacatcaacattcaaacgccgatcgtgatcaatgagaacggcgtcgcc
acgctgtcgctgacgtttgtcgatcccgacgcgagcgacacgcacacgatcttcgtcgac
tggaaagatggttcgacgcaaacgttcaacctcgccgctggtcaaacgagtttcttgacg
acgcatcagtatctcgatgacaacctgcccggcccggcgacggaagattatgacgttctg
gtccgcgtgaccgactcggcgggcgagttcagcgaggtaacctcgaagatcactgtcaac
aacgttgcgccatcgaacttgcagctcgcgccgatcacgccggtcaacgagaatggcgtc
gcgacgctcaagctgacgttcgacgaccccggttcgaaagatacacacaccgtggaggtg
aactggggagacggttcggcggtgcaggtctataacgtgccgacgggcgatcgcagcttc
acggcgacgcatcaatatctcgacgataacccgacggcgacgccgtctgacacgtacacg
gtgagcgttcgcctcgtcgacgacgatctgggcgtgacgaccgccaccacgacggcgacg
gtgaacaacgttgctccgagcaacgtgaaagtgacgccggtggcgagtatcctcgccgag
ggggggcaggcctcgctcaagctgacgttcgacgaccccggctcgcaagatacccaccag
gtcgaaatcaactggggcgacggcaacacgacggtgacgaccgccgttggccattcgctc
aacgtcaatcacacgtacggcgacaacgccacctacgcgatcatcgtcaaggtgatcgac
gacgacggcggcgtcggggtcggctcggcggcggcgctggtgagcaacgtcccgccgtcg
aacgtgaagatcgacccgatcgctacgatcgacgaaaacggcgtcgcggtgctgaagctg
acgttcgacgatccggggacgctcgattcgcacacggtcgacgtcgactggggcgacggc
acgatcgaaacgatcgccgtggcggctggttcgcgcaccctcacggcgacgcaccaatat
ctcgacgacaacccgaccggcacctcgtcagacgtttacgccgtgaaagtgaccgtccgc
gacgacgacggcggccaagcgaccggcaatgcgaccgtgcaggtggtgaacgttcccccc
agcaacgtgaaggtgacgcctgtcgccaatatcgtgaacgaaggaagccaagtcgcgctg
acggtgacgttcgacgacgccggctcgcaagacacgcaccaagtcgagattaattggggc
gatgggaacacgacggtcacgagcgccgttggtcactcgctcaacgtcaatcacgcctac
ggcgacaacggcacgtacgcgatcaatgtcaaggtgatcgacgatgacggcggcgtcggc
tttggttcggccgccgcactggtgaataacgttccgccgtcgaacgtgaagatcgatccg
atcgccgcgatcaacgagaacggcgtcgcaacgctgacgctaacgttcgacgatccgggc
acgctcgattcgcacacggtcgacatcgactggggcgatggcacgatcgaaaccgtcgcc
gtgacggccggttcgcgcacgctgaccgcaacgcatcagtatctcgacgataacccgact
ggcacttcgtccgacatctacacagtgaaggcgacggtccgcgacgatgacggcggccaa
gcggtcggtaacgccacggtgcaagtcgccaacgtccccccgtcgaacgtaaagatcgac
ccgatcgccgccatcaatgagaatggcgtcgccacgttgaaactgacgttcgacgatcct
ggctcgctcgattcacatacggtggacatcgactggggcgacggcacggtcgaaacggtc
gtcgtggcagccggttcgcgcacgctgaccgcaacgcatcagtatctcgacgataacccg
actgccacttcgtccgacatctacacggtgaaggcaacggtccgtgacgatgatggcggg
caggcgattggcaacgcgacggtgcaggttgccaacgttccgccgtcgaacgtgaagatc
gacccgatcgccgccatcaacgagaacggcgttgcgacgctaacgctgacgttcgacgat
ccgggcacgctcgattcacacacggtcgacatcgactggggcgacggcacggtcgaaacc
gtcgccgtggcggccggttcgcgcacgctcaccgcaacgcaccaatatatcgacgacaac
cccaccgacacctcgtccgacgtttacacggtcacagcgacggttcgcgacgacgatggc
ggtcaagcggtcggcaatgcaacggtgcaggtaaacaacagtgcccccagcaatgtgcag
gtgacccccgtcgccaacattgtcgacgaagggagccaagtcgcgctgacggtgacgttc
gacgactccggttcacaagacacgcaccaggttgagatcaactggggcgacggcaatgtc
acgatcgcgagcgcaacggggcacacgcttaacgcgacccacgcctatggcgataacggc
acgtacgcgattaccgtgaaggtgaccgacgacgacggcggcgttggcttcggttcggcg
gcggcactggtgaacaatgttccgccgtcgagcgtgaagatcgaccccatcgccgcgatc
aacgaaaacggcgtcgcaacgctaacactcactttcgacgatcctggttcgctcgatacc
cacacggtcgagatcgattggggcgacggcacgatcgaaacggtggccgtcgcggccggt
tcgcggacgctcaccgcgactcaccagtatctcgacgacaacccgaccggcaccgcctct
gacgtttacgaggtgaaggcgacggtccgcgacgacgatggcggccaagcggtcggcaac
gcaacggtgcaagtcaacaacgtcgccccgggaaacgtcgtcgccgcccctgtggcgagc
atcattaccgaggggagtcaggtcaatctcggcgtcacgttcgacgacgtcggctcgcaa
gatacgcaccaggttgaaatcacctggggcgatggccacgtgaccgtcggcacggcgacg
ggccacgcgttctccgccaaccatacctacgccgacaacggcgtctacgccgtttatgtg
aaggtgatcgacgacgacggcggcgtcggcgagggctcagcagcggtgcatgtaaacaac
gtggcgccgacgctcacggttcctggctcgcagacggtcaacgaagggggcgtgctgtcg
ctgccgaacatcggtcagttcaccgaccccggcttcaacaatccgctcaacgccggcaac
gtcctcaacggcggcgagaccaccgaagagttcacctacgaaatcaattggggcgacggt
tccgcgaacagcactggcgccgcaacgattgatcaactcggcagccccggcgcgccaacg
gcgggttcgttcgacggcacgcatgtctacgccgataacggcgtctacaccgtcacggtg
acggtgcgcgacgacgacggcggcgtcacgacgtcgaccttccaggtgacggtgctgaac
gtcgatccgtcgctaaagttccaaaatcccgcgatcgtcgtcaacgaagggacgccgatc
acgctcggcggcatcggcgtcggcgtgaccgaccccggcttcgacaatggcgcccagggg
acgcaggagacattccacgatgcgaccgtcgactggggcgatggcacggggccgcagtcg
ctgacgatcaacaaccgcgtgagcggttcgcccggcgtggcgacgacggccgacttcgtg
tcgacgccgcacgtttacgccgacaacggcacgtacaccgtcacggtgcgattccgcgac
gatgacggcggcttcgttgatcggacgttcacaatcaccgtcgagaacgtcgccccctcg
ctcaaccttaccaacggcgtcttcgtcatcgacgaggggcaaacgcttaatctgccgaac
ctcggaaccttcagcgatcccggcttcaacaatccgaacaaccccaatggcgcttcggtc
gagtcgttctactacacgatcgattggggcgatgggaccactcctcaaacgggccaattg
ccggcaagcgtcacgaacggttcgccgggaacgccgacgctcggcacactcgcctcgtcg
cacaagtacgccgacaacgacgccgataacaagtacacgatcaccgtgacgttgttcgac
gacgacggcggttcggtgacgaaagagatcgaagtgacggtgcggaacgtcaatccgacg
ctcaagcctatcgtcgctaccgacgtcaacaacaagggcgagacgacgctcacgttgcag
ttcaccgacccgggcgccgacaagtttaacgtccaagtcgactggggcgacgggacgatc
tcgacctaccccgtcgacgttgccgggaatgggcagacgcaggtcttcatgcacaagtac
agcggtccgcccgatccgctcaacccgaccggcgacatcacgctgacggtgcaagtgttc
gacgacgacttcgatacaccgggagtcgtcgccattggcgcgagcaatatcgagacggtc
gacatctcgcagccgggcctcggcgccgagaagttccggatcgacacgtcgccgcaggtg
gcgattctcaccttccccgatcggcaagtcgtaccgctgttgccgacggccgccgaatcg
cgactcgtcaccatcattacgactgacgacggcggcggtggcggcgacacccgcgccgca
agcgaacgttacctcgaactgtgcgtgatcaatcccgacggcacgactgggcagcgtttc
cgattgccgtcgaacgtgctgaacaacctgccggcgctcttcaagaacctgcccgacaat
cactacgtgatctatctcgtgcagtcggagacgaatgcgcgacgactcgtgatcgacgtc
ttcgttcgcaacggcaagctcatcgatccgggcgacgacagtgaaggcgcccgcgatcgg
ccgccgactgaagaggcgaccacgcaacctgccgaagaacaaccggctgccgtccccatt
ggcgacgaaggcgccgcggtcgagccgcccacgcaactcgaaccgctcgccggccttggc
atgcggccgcgctcgtcgacggcgatctaccacggcgccacgctcgccggcgtggcgatc
gccctgtcgggggccggaaagagctcctaccaccagatggaagaggccatcgcccgagcg
aaaccggaccagtggaagcggctccgctcggcgctcacccgcccgaagaagccccgttag
DBGET
integrated database retrieval system
