Lacipirellula parvula: PLANPX_5617
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Entry
PLANPX_5617 CDS
T06590
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav00260
Glycine, serine and threonine metabolism
lpav00460
Cyanoamino acid metabolism
lpav00630
Glyoxylate and dicarboxylate metabolism
lpav00670
One carbon pool by folate
lpav00680
Methane metabolism
lpav01100
Metabolic pathways
lpav01110
Biosynthesis of secondary metabolites
lpav01120
Microbial metabolism in diverse environments
lpav01200
Carbon metabolism
lpav01230
Biosynthesis of amino acids
lpav01240
Biosynthesis of cofactors
lpav04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PLANPX_5617
09102 Energy metabolism
00680 Methane metabolism
PLANPX_5617
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PLANPX_5617
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PLANPX_5617
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PLANPX_5617
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PLANPX_5617
Enzymes [BR:
lpav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PLANPX_5617
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BBO36005
UniProt:
A0A5K7XHX8
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Position
complement(6261785..6263059)
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AA seq
424 aa
AA seq
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MSNPLAAADPEVWSAVADEIQRQQDGLEMIASENYTSPAVMAAAGSVLTNKYAEGYPGKR
YYGGCEYVDVVENLAIERAKKLFGAEFANVQPHSGSQANTAIYLAALEPGDTVLGLDLAH
GGHLTHGMRLNISGMLYNFVSYGVRENDHRLDFDQIAKLAREHKPKLIVAGASAYPREIP
HGKFAEIAREVGAKLMVDMAHYAGLVAAGLHDNPVPVADFVTTTTHKTLRGPRGGLCLSK
EEYGKTINSRVFPGIQGGPLMHVIAGKAVCFGEALQPEYKTYIKQVMANAKALAEVLTAG
GLRLVSGGTDNHLMLVDVTPLGIGGKQAEHALDAAGITVNKNMIPYDQRKPMDPSGIRVG
TPALTTRGMGVDEMRTIGGWMLEALRAVDDAKVHAGIREQVRELGANFPAPTVADQFADA
TSAV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcccctcgccgccgctgatcccgaagtttggtccgccgtcgctgacgaaatc
cagcgccagcaagatggcctggaaatgatcgccagcgagaactacacgagccccgccgtg
atggcggcggccggcagcgtgctgacgaacaagtacgccgagggctaccccggcaagcga
tactacggcggctgcgagtacgtcgacgtggtagagaacctcgccatcgagcgggcgaag
aagctgtttggcgccgagttcgccaacgtgcagccccacagcggttcgcaggcgaacacg
gcgatctacctcgccgctctcgaaccgggcgacacggtgctgggcctcgacctcgcccac
ggcggccacctcacccacggcatgcggctgaacatttcgggcatgctctacaacttcgtc
agctacggcgttcgcgagaacgaccaccggctcgacttcgatcagattgccaagcttgcc
cgcgagcacaagccgaagctgatcgtcgccggcgccagcgcgtacccccgcgagattccg
cacggcaagtttgccgagatcgcccgcgaggttggcgccaagctaatggtcgacatggcc
cactatgccggactcgtcgctgcgggactgcacgacaacccggtgccggtcgccgacttc
gtaacgaccaccacgcacaagacgctccgcggcccgcgcggcggcctgtgcctcagtaag
gaagagtacggcaagacgatcaacagccgcgtcttccccggcatccaaggcggcccgctg
atgcacgtcatcgccggcaaggcggtctgcttcggcgaagcgctgcagcctgagtacaag
acctacatcaagcaggtgatggccaacgcgaaggccctggccgaagtgctgacggcgggc
ggcctgcgtctagtgagcggcggcaccgacaatcacctgatgctggtcgacgtgaccccg
ctgggaatcggcggcaagcaagccgagcacgccctcgacgccgcgggcatcacggtcaac
aaaaacatgattccgtacgaccaacgcaagccgatggacccgagcggcatccgcgtcggc
acgccggccctcactacccgcggcatgggcgtcgacgagatgcggaccatcggcggctgg
atgctggaagccctccgtgccgtcgacgatgcgaaggtgcatgccggcattcgtgagcag
gttcgcgagttgggcgccaacttcccggcgccgaccgtggccgatcagtttgccgatgcg
acgtcggctgtttga
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