KEGG   Lacipirellula parvula: PLANPX_5905
Entry
PLANPX_5905       CDS       T06590                                 
Name
(GenBank) oppD
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
lpav  Lacipirellula parvula
Pathway
lpav02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:lpav00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PLANPX_5905
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lpav02000]
    PLANPX_5905
Transporters [BR:lpav02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    PLANPX_5905
SSDB
Motif
Pfam: ABC_tran oligo_HPY SMC_N AAA_21 AAA_22 AAA_16 ATP-synt_ab AAA_29 CbiA AAA_30 AAA DUF87
Other DBs
NCBI-ProteinID: BBO36293
UniProt: A0A5K7XNA4
LinkDB
Position
complement(6586033..6587892)
AA seq 619 aa
MSTAVIDVADLKTYFHTEEGVVRAVDGVSFRIEPGRTLGIVGESGSGKSVTSLSIMRLLA
SSAQIESGRIALLGRDLVRLPEPEMRSIRGREISMIFQEPMTSLNPVFTVGDQVMEAILL
HQKVTKAEARQRTIELFKEVGIPNPEQRVDSYPHQMSGGQKQRVMIAMALSCNPKLLIAD
EPTTALDVTIQAQILDILRKLRDERGMAILFITHDLGVIAEIADDVLVMYRGEEVEYGRV
LDIFAHPKHPYTKGLLACRPRLDTPYKLLPTVDDFMSSRVVDGRLEITEKQLDAKRLNEL
KTHGRGRLLHPPSELAAMGHAVGATPAADTQYIPEGTKPLLAVNNLQVHFPVRRGILART
VDHVRAVDGISFNVYRGQTLGLVGESGCGKTTAGRAILRLVEPTGGQVWLDGVDVASLGS
SDLRQMRRRMQIIFQDPYGSLNPRMTVEAAITEPMVIQKIGANRKERRDRAAALLEEVGL
QTAHLRRYPHEFSGGQRQRICIARAIAVEPEFLICDESVSALDVSVQAQVLNLLKRLQET
RGLTYIFISHDLSVVKFMADMMAVMNAGKIVEFGPSEAIYRDPREAYTRKLISATPNDDL
DHIRQVVAERERTWAAKKA
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgtccaccgcagtcatcgacgtcgccgacctcaagacctacttccacaccgaagaaggc
gtcgtccgcgccgtcgacggggtgtcgttccgcattgagcccggccgtacgctcggcatc
gtcggcgagagcggctcgggcaagagcgtgacctcgctttcgatcatgcggctgctcgcg
tcgtcggcgcaaatcgaatcgggccgcatcgcgctcctcggtcgcgatctcgtccgcctg
cccgagccggaaatgcggtccatccgcggccgcgagatcagcatgatctttcaggagccg
atgacctcgctcaacccggtcttcaccgtcggcgatcaggtgatggaggcgattctgctc
catcaaaaggtgacgaaggccgaagctcggcagcggacgatcgagctgttcaaggaagtc
ggcatcccgaaccccgaacagcgcgtcgactcgtacccgcaccaaatgtcgggcggccag
aagcagcgcgtgatgatcgcgatggccctctcgtgcaatccgaagctgctgatcgccgac
gaaccgaccaccgcgctcgacgtgacgatccaggcgcagattctcgatatccttcgcaag
ctccgcgacgagcgcggcatggcgattttgttcatcacgcacgacctaggcgtcatcgcc
gaaattgccgacgacgtgctagtgatgtaccgcggcgaggaggtcgagtatggccgcgtg
ctcgatatcttcgcccacccgaagcatccttacacgaaggggctgctcgcctgccggccg
cgtctcgatacgccctacaagctgctgccgacggtcgacgacttcatgtcgagccgcgtt
gtcgacggacggctggagatcaccgagaagcaactcgacgccaagcggctgaacgaactt
aagacgcacggccgcggccgattgttgcatccgccgagcgaactcgccgcgatgggtcac
gccgtcggcgcgacgccagccgccgatacgcagtacatccccgaaggcaccaagccgctg
ctggccgtgaacaacctgcaggttcacttccccgtccgccgcggcatcctcgcgcgcacg
gtcgaccatgtccgcgccgtcgacggtatcagcttcaacgtctaccgcggccaaacgctc
ggcctcgtcggcgaatcgggctgcggcaagacgaccgctggccgggcgatcttgcgactc
gtcgaaccaaccggcggccaagtttggctggacggcgtcgacgtcgcctcgctcggctcc
tccgacctacggcagatgcgccgccgcatgcagatcatctttcaagatccctacggctcg
ctcaacccgcggatgaccgtcgaagccgcgatcactgagccgatggtgattcaaaagatc
ggcgcgaaccgcaaagaacgccgcgaccgcgccgcggcattgctcgaagaagtcggcctg
caaacggcccacctccgccgctacccgcacgagttctccggcggccagcgacagcgcatt
tgcatcgcccgcgcgatcgctgtggagcccgagttcctcatctgtgacgagtcagtctcg
gcactagacgtatccgtgcaagcccaggtcctcaacctgctgaagcggctgcaagaaacc
cgcgggttgacctacatcttcatcagccacgacctgagcgtcgtaaaattcatggccgac
atgatggcagtgatgaacgccggcaagatcgtcgagttcggcccgtcggaagcgatctac
cgcgatccgcgcgaggcgtacacgcggaagctgatcagcgcgacgccgaacgacgacctc
gatcacattcgccaagtggtcgccgaacgcgaacggacctgggcagcgaagaaagcctag

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