Lacipirellula parvula: PLANPX_5905
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Entry
PLANPX_5905 CDS
T06590
Name
(GenBank) oppD
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
lpav
Lacipirellula parvula
Pathway
lpav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PLANPX_5905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpav02000
]
PLANPX_5905
Transporters [BR:
lpav02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PLANPX_5905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_16
ATP-synt_ab
AAA_29
CbiA
AAA_30
AAA
DUF87
Motif
Other DBs
NCBI-ProteinID:
BBO36293
UniProt:
A0A5K7XNA4
LinkDB
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Position
complement(6586033..6587892)
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AA seq
619 aa
AA seq
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MSTAVIDVADLKTYFHTEEGVVRAVDGVSFRIEPGRTLGIVGESGSGKSVTSLSIMRLLA
SSAQIESGRIALLGRDLVRLPEPEMRSIRGREISMIFQEPMTSLNPVFTVGDQVMEAILL
HQKVTKAEARQRTIELFKEVGIPNPEQRVDSYPHQMSGGQKQRVMIAMALSCNPKLLIAD
EPTTALDVTIQAQILDILRKLRDERGMAILFITHDLGVIAEIADDVLVMYRGEEVEYGRV
LDIFAHPKHPYTKGLLACRPRLDTPYKLLPTVDDFMSSRVVDGRLEITEKQLDAKRLNEL
KTHGRGRLLHPPSELAAMGHAVGATPAADTQYIPEGTKPLLAVNNLQVHFPVRRGILART
VDHVRAVDGISFNVYRGQTLGLVGESGCGKTTAGRAILRLVEPTGGQVWLDGVDVASLGS
SDLRQMRRRMQIIFQDPYGSLNPRMTVEAAITEPMVIQKIGANRKERRDRAAALLEEVGL
QTAHLRRYPHEFSGGQRQRICIARAIAVEPEFLICDESVSALDVSVQAQVLNLLKRLQET
RGLTYIFISHDLSVVKFMADMMAVMNAGKIVEFGPSEAIYRDPREAYTRKLISATPNDDL
DHIRQVVAERERTWAAKKA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgcagtcatcgacgtcgccgacctcaagacctacttccacaccgaagaaggc
gtcgtccgcgccgtcgacggggtgtcgttccgcattgagcccggccgtacgctcggcatc
gtcggcgagagcggctcgggcaagagcgtgacctcgctttcgatcatgcggctgctcgcg
tcgtcggcgcaaatcgaatcgggccgcatcgcgctcctcggtcgcgatctcgtccgcctg
cccgagccggaaatgcggtccatccgcggccgcgagatcagcatgatctttcaggagccg
atgacctcgctcaacccggtcttcaccgtcggcgatcaggtgatggaggcgattctgctc
catcaaaaggtgacgaaggccgaagctcggcagcggacgatcgagctgttcaaggaagtc
ggcatcccgaaccccgaacagcgcgtcgactcgtacccgcaccaaatgtcgggcggccag
aagcagcgcgtgatgatcgcgatggccctctcgtgcaatccgaagctgctgatcgccgac
gaaccgaccaccgcgctcgacgtgacgatccaggcgcagattctcgatatccttcgcaag
ctccgcgacgagcgcggcatggcgattttgttcatcacgcacgacctaggcgtcatcgcc
gaaattgccgacgacgtgctagtgatgtaccgcggcgaggaggtcgagtatggccgcgtg
ctcgatatcttcgcccacccgaagcatccttacacgaaggggctgctcgcctgccggccg
cgtctcgatacgccctacaagctgctgccgacggtcgacgacttcatgtcgagccgcgtt
gtcgacggacggctggagatcaccgagaagcaactcgacgccaagcggctgaacgaactt
aagacgcacggccgcggccgattgttgcatccgccgagcgaactcgccgcgatgggtcac
gccgtcggcgcgacgccagccgccgatacgcagtacatccccgaaggcaccaagccgctg
ctggccgtgaacaacctgcaggttcacttccccgtccgccgcggcatcctcgcgcgcacg
gtcgaccatgtccgcgccgtcgacggtatcagcttcaacgtctaccgcggccaaacgctc
ggcctcgtcggcgaatcgggctgcggcaagacgaccgctggccgggcgatcttgcgactc
gtcgaaccaaccggcggccaagtttggctggacggcgtcgacgtcgcctcgctcggctcc
tccgacctacggcagatgcgccgccgcatgcagatcatctttcaagatccctacggctcg
ctcaacccgcggatgaccgtcgaagccgcgatcactgagccgatggtgattcaaaagatc
ggcgcgaaccgcaaagaacgccgcgaccgcgccgcggcattgctcgaagaagtcggcctg
caaacggcccacctccgccgctacccgcacgagttctccggcggccagcgacagcgcatt
tgcatcgcccgcgcgatcgctgtggagcccgagttcctcatctgtgacgagtcagtctcg
gcactagacgtatccgtgcaagcccaggtcctcaacctgctgaagcggctgcaagaaacc
cgcgggttgacctacatcttcatcagccacgacctgagcgtcgtaaaattcatggccgac
atgatggcagtgatgaacgccggcaagatcgtcgagttcggcccgtcggaagcgatctac
cgcgatccgcgcgaggcgtacacgcggaagctgatcagcgcgacgccgaacgacgacctc
gatcacattcgccaagtggtcgccgaacgcgaacggacctgggcagcgaagaaagcctag
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