Lacipirellula parvula: PLANPX_6138
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Entry
PLANPX_6138 CDS
T06590
Name
(GenBank) DNA polymerase III beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav03030
DNA replication
lpav03430
Mismatch repair
lpav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PLANPX_6138
03430 Mismatch repair
PLANPX_6138
03440 Homologous recombination
PLANPX_6138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpav03032
]
PLANPX_6138
03400 DNA repair and recombination proteins [BR:
lpav03400
]
PLANPX_6138
Enzymes [BR:
lpav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PLANPX_6138
DNA replication proteins [BR:
lpav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PLANPX_6138
DNA repair and recombination proteins [BR:
lpav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PLANPX_6138
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
BBO36526
UniProt:
A0A5K7XNC2
LinkDB
All DBs
Position
6845469..6846584
Genome browser
AA seq
371 aa
AA seq
DB search
MKISCDREQLLQAFQTVAAVAPSRSPKPILQNVKLDVTPDGASLTATDLEVGIRHAVGGV
DVQAPGSVVLPVTRFGSILRESADQTIHIESDGNGATIRGERSRFQLPAENPAEFPPVGG
FEETSYFEVPARLLRELIRRTVFATDNESSRYALGGVKLEFDTDMVTAIGTDGRRLAKMV
GPVTKQGEPAAVQQNTIVPTRAMQLIERAIAPTDTEVQLAVRGNEFIVHSPRATISARLL
EGRFPEWRKVFPERGVGQQIELAAGPTHAAVRQAAIVTSEESRGIDFTFGDGSLVLAGKA
AEVGQSRVELPIGYDGQEITITLDPRFVIDFLKVLDSDKTFSIELKDGESAAVCSTEDGY
GYVIMPLARDR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttcctgcgatcgcgagcaactcctgcaagccttccagacggtcgccgccgtc
gctcccagccgtagcccgaaaccgatcctgcagaacgtcaaactcgacgtcaccccggac
ggcgcctcgctcaccgccaccgacctcgaagttggcatccgtcacgctgtcggcggcgtc
gacgttcaggcccccggctcggtggtgctgccggtcacgcggttcggatcgatcctacgc
gagtcggccgatcaaaccattcacatcgaatcggacggcaacggcgccacgatccgcggc
gagcgaagccgcttccaactccccgccgagaacccggccgagttcccccccgtcggcggc
tttgaagagacgagctacttcgaagtccccgctcggctccttcgcgaactgatccgccgc
acggtcttcgccaccgataacgaaagcagccgttacgccctcggcggcgtgaagctggaa
ttcgatacggacatggtcaccgcgatcggcaccgacggccgccgcctcgcgaaaatggtt
ggccccgtcacgaagcaaggcgaacccgccgcggtgcagcagaacacgatcgtgccgacc
cgcgcgatgcaactgatcgaacgggcgatcgctccgaccgatactgaagtgcaactcgcc
gtccgcggcaacgagttcatcgtccacagtccgcgggcgacgatctcggctcgcttgctt
gaaggccgcttccccgaatggcggaaggtcttccctgaacgcggcgtcggccagcagatc
gaactcgccgccggcccgacgcacgccgccgttcgccaagcggcgatcgtcacgagcgaa
gaaagccgcggcatcgatttcacgttcggcgacggttcgctggtcctcgccggcaaggcg
gccgaagtgggccaatcgcgcgtcgaactcccgatcggctacgacggccaggagatcaca
atcacgctcgacccgcgattcgtgatcgacttcctgaaggtgctcgacagcgacaagaca
ttcagcatcgagctcaaggacggcgaaagcgccgcggtctgcagcacggaagacggctac
ggctacgtgatcatgccgctggcacgtgatcgttag
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