Lactiplantibacillus plantarum B21: SH83_01325
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Entry
SH83_01325 CDS
T03680
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lpb
Lactiplantibacillus plantarum B21
Pathway
lpb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SH83_01325
09124 Replication and repair
03420 Nucleotide excision repair
SH83_01325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpb03021
]
SH83_01325
03036 Chromosome and associated proteins [BR:
lpb03036
]
SH83_01325
03400 DNA repair and recombination proteins [BR:
lpb03400
]
SH83_01325
Enzymes [BR:
lpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SH83_01325
Transcription machinery [BR:
lpb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SH83_01325
Chromosome and associated proteins [BR:
lpb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SH83_01325
DNA repair and recombination proteins [BR:
lpb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SH83_01325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
PhoH
nos_propeller_2
Motif
Other DBs
NCBI-ProteinID:
AJO73060
UniProt:
A0A165C1I3
LinkDB
All DBs
Position
complement(289505..291874)
Genome browser
AA seq
789 aa
AA seq
DB search
MATKIGIRQLVEFVLRQGDLNEVKNSQNTALNGAKIHRQLQSSRGEDYDSEVYLKKIVTM
NDTDYIIAGRADGIQLNDDGALIEEIKTSDQVFEDLSTNTLTLYWGQIKVYGYLLLQEHP
DLEQVTLQLTYFQVINEKITKTQQILHRAELDAFFHDLITEYEYWLTLRADLRRQRNASI
EDLPFPFPAFRPGQHELAGAVYKTIRLQKRLFVEAPTGTGKTISTLFPAIKAMGEDVIER
LFYLTAKQSTRHVAEEAVTLMSHDGLKLKSITLTAKDQIRFPEEQDVLPEDNPYMIGYYD
RLKPALKDLLTHEDQITRSVIEQYARKHTVDPFEFSLDTSLFCDVIICDYNYLFDPLVYL
QRFFSERDDDNFFLVDEVHNLVSRSRDMYSAAVSDQPISALLKLAKPDKSQPSDDLQREL
KKVRRSFTRISKTLIDDQVTEQVLPDPPDKLLRTLRTFNEFVTDWLAQQKPGPLLDAVRD
YFFACLTFVKIGDLYDGSYQTRFVLDGHHLTIKELCLDPSDFLNRSLELGSGAVLFSATL
TPMAYYQRVLGGEANSLAYQLPSPFPPKHQAILVTQYVQTTYHEREHNVPRIIASLHAML
TAKHGNYLVFFPSYGYLLQIKTAFEAAYPDVATTAQASTMDATARQTFLNQFQSAPSQTL
LGFCVLGGIFSEGIDLRGDRLIGVAIVSVGLPGINPETNLIRDYYDHQNGLGFAYAYQLP
GMNNVLQAAGRLIRSAKDTGIVLLLDQRFASRRYTDLFPAHWQYYQTIQSVPQLEATIAN
FWHQMEVTH
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaagattggaattcgacaattggtagaattcgtcttgcgacaaggcgattta
aatgaagtaaagaatagccagaacactgcgttgaacggtgctaagattcatcgtcagctc
cagagtagtcgtggtgaagactatgatagcgaagtttacctgaaaaaaattgtgacgatg
aacgatactgattacattatcgcgggtcgggcagacgggattcagttaaatgatgatggg
gcgttgattgaagaaatcaaaacatccgatcaagtcttcgaggacttaagtaccaacacg
ttgacactttactgggggcagatcaaagtctacggttacctgttactgcaagaacatccc
gatcttgagcaggtcacgttgcagctgacctactttcaagtcatcaatgaaaaaatcacg
aagacccagcaaatccttcaccgggctgaactagacgcattcttccacgacttaattaca
gaatatgaatactggttgacattacgagccgatttacgacgacaacgaaacgcttctatt
gaagacttgccatttccgtttccagcttttcgaccgggccaacatgaattggctggcgct
gtttataagacaattcggttgcaaaaacgcctctttgtcgaagcaccaactgggacgggg
aaaacgatctcaacgctatttccggccatcaaagcaatgggcgaagacgtgattgagcgc
ctcttttatctgaccgctaagcaaagtacgcgccacgttgctgaagaagcggtcacgcta
atgagtcatgacggactcaaactgaaaagcattacgctaactgccaaggatcagattcgg
tttcccgaggaacaagatgtacttccggaagataatccttatatgattggctactacgac
cgacttaaaccagcactcaaggatctgttgacccatgaagaccagattacccgttccgtg
attgaacagtatgctcgcaagcatactgtcgatccgtttgaattttcactcgacacgtcg
ctcttctgtgatgtgattatttgtgactacaactatctttttgacccattagtctattta
caacggttctttagcgaacgtgatgacgacaactttttccttgtcgatgaagtccacaac
cttgttagtcgctcccgtgatatgtactctgcggccgttagtgaccagccaatcagtgcg
ttgctaaaattagccaagcccgataaaagtcagccgagtgacgacttacaacgcgaactc
aagaaagtccggcgtagttttacgcgcatcagtaaaaccttgattgatgaccaagtaacg
gaacaggtgctacctgatcccccggacaaattattacgcaccctcagaacatttaatgaa
tttgtgactgactggttggcgcaacaaaagccggggccactgctcgacgccgtccgtgac
tatttcttcgcctgtctgacctttgttaaaattggcgacctatatgatggcagctaccag
acgcgcttcgtccttgacggtcatcacttaacgatcaaggaactctgcctagatcccagt
gactttcttaatcggtcattagagctcggcagtggtgctgtcctattttctgcgacgctg
accccgatggcttactaccagcgggtgcttggcggtgaagccaacagtttggcctaccag
cttccatcaccatttccaccaaagcatcaggccattctcgtcacccagtacgtccagaca
acgtatcacgaacgcgaacataacgtgccccggattattgccagcttgcacgccatgttg
acagctaaacatggcaactacctcgtgttctttccgtcgtatggctatctgctgcagatc
aaaactgcctttgaagccgcctaccctgatgtggcaactaccgcccaagcctcgacgatg
gatgcaactgcccggcagacctttttgaaccagtttcagtcagccccctcgcaaacctta
ctcggtttctgcgtactgggtggtatcttctccgaaggcattgacttacgtggcgaccgt
ttgattggagtcgctatcgtcagtgtcggtctgccgggtatcaaccctgaaacgaacttg
attcgtgactactacgaccatcaaaacggcttaggattcgcctacgcttaccaactgcca
ggcatgaacaacgtcttacaggctgctggccgcctgatccgcagtgccaaggacaccgga
atcgttctcttgttagaccaacgcttcgctagtcggcgctacacagatttatttccagca
cattggcagtactatcagacgatccaatcagtcccgcagctcgaagcaacgattgccaac
ttttggcaccaaatggaggtgactcattaa
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