Lactiplantibacillus plantarum B21: SH83_03255
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Entry
SH83_03255 CDS
T03680
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lpb
Lactiplantibacillus plantarum B21
Pathway
lpb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SH83_03255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpb03400
]
SH83_03255
Enzymes [BR:
lpb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SH83_03255
DNA repair and recombination proteins [BR:
lpb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SH83_03255
Prokaryotic type
SH83_03255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
UPA_SH3BP4
Motif
Other DBs
NCBI-ProteinID:
AJO73413
UniProt:
A0A165PWM5
LinkDB
All DBs
Position
721527..722219
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AA seq
230 aa
AA seq
DB search
MKAFIHTDWWDVLKPEFEKPYYHQLHEFLKNEYRTKNIHPDMYNIFQAFEWTPFADTKVV
ILGQDPYHGPGQAHGLSFSVLPGVAVPPSLVNIYKELQNDVGCTPVNHGYLESWAKQGVL
LLNSVLTVQNGVAFSHAGKGWERLTDVAIQRLSERSTPVVFILWGKAARSKIKLIDTQTN
VVLQAPHPSPLSAYRGFFGSKPFSKTNIALTSFGEQPINWQLPEHVNLEH
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgtttattcacacggactggtgggacgtcttaaaaccagagtttgagaagccg
tattaccaccaattacacgaatttttgaaaaatgaataccgaacgaaaaatattcaccca
gatatgtataatatttttcaggcctttgaatggacgccatttgctgacacgaaggtcgtt
attttaggtcaggatccgtatcatggtcctggtcaggcacacggactgagtttttcagtg
ttaccgggcgtggcagtgcccccatcactagtcaatatctataaagaattgcaaaatgat
gttgggtgtacgcccgtcaaccacggttacttggaaagttgggccaagcagggagtcttg
ttattgaactccgtgctgactgttcaaaatggtgtggccttttcacacgctggtaagggc
tgggaacgacttacggacgttgccattcagcgtttatcggaacgatcgacgccggttgtc
tttatcttgtggggtaaggcggctcggtccaagattaagctgattgatacccagacgaat
gtcgtgctacaagcacctcatccgagtccgctttcagcttatcgcggattctttgggtcc
aaaccattttcaaaaacgaacattgcgttaacatccttcggcgaacagccaatcaattgg
cagttaccagagcacgtcaatcttgagcattaa
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