Lactiplantibacillus plantarum B21: SH83_05870
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Entry
SH83_05870 CDS
T03680
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lpb
Lactiplantibacillus plantarum B21
Brite
KEGG Orthology (KO) [BR:
lpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpb03019
]
SH83_05870
Messenger RNA biogenesis [BR:
lpb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SH83_05870
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
AJO73881
UniProt:
A0A0G9F776
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All DBs
Position
1289639..1290619
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AA seq
326 aa
AA seq
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MAKKLFDYQLDETVDGYFLLKDSEVRIAKNGKKFLAINFQDTSGEISGKFWDASDTDVEN
FQAGRIVHLKGKRENYQGNPQIKIQQMRLTHSGEPQEVQQFVEHAPLKTDTMADEINQFV
FEITEPNWNRIVRHMLTTFHDRFFSYPAAKKNHHAFAGGLAYHTLSILRLAKAVADQYPH
VNRALLYAGAILHDMGKTIEMSGPVSTTYTLAGNLVGHIVLIDEQIVETCQQLKIDEQSE
SVLVLRHTILAHHGLLEYGSPVRPHIMEAEILHDLDELDASIQMMQTSLGHAEPGTYTER
IFAMDGRNFYRPTGDQTKGELPDEQN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaagttatttgattatcaattagatgaaaccgtggatggctattttttgttg
aaagattcggaagttcgcatcgccaagaacggcaagaagtttttagccattaattttcag
gatacttccggcgagatttccgggaagttttgggatgcaagcgatacagatgtcgaaaac
tttcaggcaggtcggatcgttcatctgaaaggtaaacgcgaaaactatcagggtaatccg
caaatcaaaattcaacaaatgcggctcactcatagtggcgaaccgcaagaagtgcaacaa
tttgtggaacacgcaccactaaagaccgacacgatggcggatgaaatcaatcagtttgtc
tttgaaattactgaacctaattggaatcgaattgttcgccacatgttaacgacatttcat
gaccggttctttagctatcccgcggcgaagaaaaatcatcacgcgttcgccggtggctta
gcttatcacacgttatcaattttgcgcttagctaaggcagttgccgatcagtatccccac
gttaaccgggccttactatatgccggtgcgattttgcacgacatgggtaagacgattgaa
atgtcggggccggtctcgacgacttatacgttggcagggaacttggtcggtcacattgtc
ctgatcgatgaacaaatcgtggagacttgtcaacagttgaaaattgacgagcagtcggaa
tctgttttagtcttgcggcatacgattcttgcgcaccatggtttgttagaatatgggtca
cccgttcggccccatattatggaagctgaaatcttacatgacttggacgagttggacgcg
tcgattcaaatgatgcagacttcacttggacacgcagagccgggcacgtatacggagcgg
atctttgctatggatggtcgtaatttttaccggccaactggtgatcaaacgaagggcgaa
ttaccagacgaacaaaactaa
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