Lactiplantibacillus plantarum B21: SH83_06265
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Entry
SH83_06265 CDS
T03680
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lpb
Lactiplantibacillus plantarum B21
Pathway
lpb03030
DNA replication
lpb03410
Base excision repair
lpb03420
Nucleotide excision repair
lpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SH83_06265
03410 Base excision repair
SH83_06265
03420 Nucleotide excision repair
SH83_06265
03440 Homologous recombination
SH83_06265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpb03032
]
SH83_06265
03400 DNA repair and recombination proteins [BR:
lpb03400
]
SH83_06265
Enzymes [BR:
lpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SH83_06265
DNA replication proteins [BR:
lpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SH83_06265
DNA repair and recombination proteins [BR:
lpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SH83_06265
NER (nucleotide excision repair)
GGR (global genome repair) factors
SH83_06265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Cupin_8
Motif
Other DBs
NCBI-ProteinID:
AJO73958
LinkDB
All DBs
Position
1371230..1373878
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AA seq
882 aa
AA seq
DB search
MAKKLLLIDGNSVAFRAFFALHSQLERFVNPDGLHTNAIYGFNTMLDHMIKAVEPTDMLV
AFDAGKTTFRTAMYDNYKGGRAKTPSEFSEQMPYIKQLLDAYGIKHYELKDYEADDIIGT
LAGQADQTGYTTTVVTGDRDLTQLTTEHTTVAVTVKGVSEVEHYTPAHVEEKLGITPAQI
IDMKGLTGDTSDNYPGVTKVGEKTALKLLKQYGTMEGIYENIDAMKQSKMKEHLIEDREQ
AAQAKVLATIKRDAPIDVQLADLSYDGPDLDQLAAFYQKMDFQSFLKKLHLQSDEPATPI
DYTVLTKANLTELQQFTDHVDFYLEMPTPNYHTSAFAGFAIGADDHWYISRDVELLMQPT
VADLLSSTTITKDVFDMKRTTVGLNRLGIQLGKVDFDLLLVSYLLDTNDNSNDLGSLAEQ
HGYTDLPSDETVYGKGVKRAIPEDDDVFFSHLARKLAAIASLKPQLLKELAANEQDQLYD
DIEKPMANVLAQMEIAGITVDSSRLKAMGSQFTERLSEIEQTIYQEAGEEFNINSPKQLG
HILFEEMKLPVIKKTKTGYSTAVDVLEKLAPEAPIVANILQYRQISKIQSTYVVGLLDAI
HSADQKVHTRYLQTLTQTGRLSSVDPNLQNIPVRLEEGRKIRQAFVPSHEGWQIFSSDYS
QIELRVLAHITDDENMQAAFKAGDDIHAATAMRIFHLNSAEEVTPNIRRQAKAVNFGIVY
GISDYGLSQNIGITRKQARSFIDAYFKEYPGVKKYMDEIVQTAKKQGYVETISHRRRYLP
DINSKSFNQRSFAERTAMNTPIQGSAADIIKIAMIKMQDKLQAAGLKATMLLQVHDELIF
EAPKEEIPVLEKLVPSVMDSAVQLAVPLKVESHYGDTWYDAK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaattattactgattgatggtaacagtgtggcatttcgggcgttctttgcg
ttgcatagtcaactggaacggttcgtaaatccagacggcctgcataccaacgccatttat
ggcttcaatacaatgcttgaccacatgatcaaggcagtcgaacccacggatatgttagtg
gcttttgatgcgggtaagaccacgtttcgaacagccatgtacgataattacaagggtggc
cgggctaagacgcctagtgagttttctgaacaaatgccgtatatcaaacagctattagac
gcgtatggtatcaaacattatgaattaaaagactacgaagccgatgacattattggcaca
ctggccggtcaagcggatcaaaccggctacaccacgacggtcgtcactggtgaccgtgat
ttgacgcagttgacgaccgagcataccacggtggccgtgaccgttaaaggtgtttctgaa
gtggaacactatacgccggcgcacgttgaagaaaagctgggcatcacaccggcacaaatt
attgacatgaaggggttgacaggtgatacctcggataactatccgggtgtcaccaaggtt
ggtgagaagaccgcccttaaattactcaaacagtatggtacgatggaaggcatttatgaa
aacatcgatgccatgaagcagagcaagatgaaggaacatctgattgaggatcgcgaacaa
gcggcgcaggctaaggtgctagcaacaatcaagcgggatgcgccgattgatgttcaattg
gctgatttatcctatgatggcccggatcttgaccagctggccgcgttttatcagaagatg
gactttcaatcatttttgaagaaattacacctacagtcggacgaaccagcaacgcccatt
gattataccgtcttgacgaaagctaacctgacggaattgcaacaatttaccgatcacgtg
gacttttatttggagatgccaacgccgaactaccacacgtcggcctttgctggctttgcc
atcggagcggatgatcactggtacatcagtcgggatgtggaattattaatgcaaccgact
gtggctgatctcttgagtagcacaacgattaccaaggacgtttttgatatgaaacgcacg
acggtcgggcttaatcgtttgggtattcagctaggtaaagtcgattttgatcttttactc
gtttcatacttattagatacaaatgataacagtaacgatttgggaagtttagctgagcaa
cacgggtacactgacttaccgagtgacgagaccgtttatggtaagggcgttaagcgtgcc
attcctgaagatgatgacgtcttctttagtcatctcgcccggaaattggccgcaatcgct
agtttgaagccacagttattaaaggaattggcagccaatgagcaggatcaactttacgat
gatatcgaaaaaccgatggctaatgtcttagctcagatggaaatcgccggcattacggtc
gacagcagtcgacttaaagccatgggcagtcagtttacagaacggttgagtgaaattgaa
cagacgatttatcaagaagccggtgaagagttcaatattaattcacctaagcaactaggt
cacatcttgtttgaagaaatgaaattacccgtaatcaagaagaccaagacagggtattct
accgccgtagacgttctagaaaagttagcaccggaagcaccaatcgtcgctaatatttta
caatatcgtcagatttcgaagattcaatcgacctacgttgtcggtttgttagatgccatt
cattctgctgatcaaaaagtgcatacgcgctacttgcaaacgttgacccaaaccggccgg
ttgtcgtccgttgatccaaacttacaaaacattccggtgcgcttggaagaaggacgtaag
attcgacaagcctttgttcctagtcatgaaggttggcagattttctcgtctgattattcg
caaatcgaattacgggttctcgcgcatattactgatgatgaaaatatgcaggccgctttt
aaagcgggtgatgatattcatgccgcaacggccatgcgaatctttcatttgaactcagct
gaagaggtgacgccaaatattcgacggcaagccaaggcggttaactttggaatcgtctat
ggaattagtgattacggcttgtcacaaaatatcggcattacgcgtaaacaggctcgcagc
tttattgacgcttacttcaaagaatatccgggtgtcaaaaagtatatggatgaaattgtc
caaacggcgaaaaaacaaggttatgtggaaaccatttcacatcgacgccggtacttgcca
gatattaattccaagagcttcaaccaacgctcattcgctgaacggacagccatgaatacc
cccatccaagggagtgcggctgatattatcaagattgcgatgattaagatgcaagataag
ttacaggctgcgggtttgaaagcaaccatgctgttacaagttcatgatgaattgattttt
gaagcgccaaaagaagaaattccagttttagaaaaattagtgccaagcgtgatggattcc
gccgtacagttagccgtaccgttaaaggttgagagccactacggtgatacttggtacgat
gcaaaatag
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