Lactiplantibacillus plantarum B21: SH83_08150
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Entry
SH83_08150 CDS
T03680
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lpb
Lactiplantibacillus plantarum B21
Pathway
lpb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lpb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SH83_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpb03021
]
SH83_08150
Transcription machinery [BR:
lpb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SH83_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Myo5a
Motif
Other DBs
NCBI-ProteinID:
AJO74314
UniProt:
A0A0G9FAU2
LinkDB
All DBs
Position
complement(1767826..1768932)
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AA seq
368 aa
AA seq
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MAKAKATTEYDKAVKALIKEYKKTGSIQYDELSDKLAAPYKLDASGIDKLLQKVEDAGIS
VVDEKGDPDARAVKSVKKVSKKELSDAGSASGIKINDPVRMYLKEIGRVDLLTADEEVAL
ALRIEQGDESAKQELAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEIG
AEMDMPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPADAAAYELLKEQL
EGVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KQLKDFLE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcaaaagcaacgacggaatacgacaaagccgttaaagcattaattaaggaa
tataagaaaactggtagcattcaatatgatgaattatcagataaattagcagcgccttac
aaactagatgctagtggcattgataaattattacaaaaggttgaagatgctgggattagt
gttgttgatgaaaaaggtgatcctgatgctcgagcggtcaaaagtgtcaaaaaagtttct
aagaaggaacttagtgacgctggctcggcttctggaattaaaatcaatgatcccgtgcgg
atgtatttgaaagaaattggtcgtgtcgacttgttaacggctgacgaagaagtcgcttta
gcactccgaatcgaacaaggtgatgaatctgccaagcaagaattagccgaagccaactta
cggttggtcgtttcgattgccaaacgttacgtgggtcggggaatgcaattccttgatttg
attcaagaaggtaacatggggctaatgaaggccgttgaaaagtttgattaccgtaaagga
ttcaagttctcaacgtacgcgacttggtggattcgccaagcaattacgcgggcaattgct
gaccaagcgcggaccattcggattccagtgcacatggtcgaaactattaacaaattaatt
cgaattcaacggcaactgttacaagatttagggcgcgaaccaactcctgaagaaattggg
gctgaaatggacatgccaacggaaaaggttcgtgaaatcttgaagatcgcacaagaaccc
gtttcattggaaacgccaattggtgaagaggacgattcacacttaggtgacttcatcgaa
gaccaagacgcaacctcaccagcggatgccgcggcttatgaattgttgaaagaacaactg
gaaggtgtccttgataccttgacggaccgggaagaaaacgtcttacgcttacggttcgga
cttgatgatggtcggacccggacactggaagaagttggaaaagtcttcggtgtgacccgt
gaacggatccgccaaatcgaagccaaggcgctacggaagttacgccacccatcacgtagt
aaacagttaaaagatttcttggaataa
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