Lactiplantibacillus plantarum B21: SH83_08855
Help
Entry
SH83_08855 CDS
T03680
Name
(GenBank) recombinase RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lpb
Lactiplantibacillus plantarum B21
Pathway
lpb03410
Base excision repair
lpb03430
Mismatch repair
lpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SH83_08855
03430 Mismatch repair
SH83_08855
03440 Homologous recombination
SH83_08855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpb03400
]
SH83_08855
DNA repair and recombination proteins [BR:
lpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SH83_08855
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SH83_08855
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SH83_08855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AJO74447
UniProt:
A0A166BHC7
LinkDB
All DBs
Position
complement(1905126..1907459)
Genome browser
AA seq
777 aa
AA seq
DB search
MLAAKKKWVPRLTTAIDEADVDKLAEAASVTPLVARLLIMRGINTAEEAAPFLHADQQPL
LDPTTMHDMEKAVDRIQEAIIAGDQITIYGDYDADGLTSTSIMYETLDQIGANVNYYIPD
RFKDGYGPNQAAFDRLIAAGTKLFVTVDNGVAGNAVINQVQEQGIDVVVTDHHELPTELP
HAYAIVHPRHPEGSYPFGGLSGAGVAFKVATALLEEVPEELLDLAAIGTVADLVSLTGEN
RTLVTLGLKVLQQTTRPGLAALIQEAGLIPDKLTETNIGFGIAPRLNALGRLQSAQSGVE
LLTTLDDERATALAKQVNQLNEKRQGLVKTISASAIEQAQTSENEARQTLVITGHGWHEG
VLGIVASHVVETTGKPTLVLNEDDGGRLKGSGRSVEAYNLFAAIDPVRESLVAFGGHHMA
VGLTVMADQLATLKEAMEAAAGQQLADNAQVSLPIDGTLPLAEATLATLADIQALAPFGT
DNPAPLFELVPTTVPQARAIGSDQQHLKLQLGDGTNTIDAIGFSMGTALPAIQASPTDVT
LVGELSENTWNGQTKPQIMVKDIAVTGTQVIDARTQHLSAHLFQAPGVYLFFHQRLLKKV
EQYLGSQAQAVWVGDTKTDLTAVTANQAVFIVDCPDTLADMTQVLSTIALDQLTLYLYRQ
ESVYLTGMPNRAQFAKLFQFTAAHHDVDIHHQLTLVAKHLHIERNLLIFMIQVFFEVGFV
KINDGVMNGVSNPAKADLHHAPSYQLREQQIVAEETLLYSKSAALQVWVKNQAAVKN
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggcaaagaaaaagtgggtgccacggttaacaacggccattgatgaagccgat
gttgataagttagctgaggcggccagcgtgacccctttagttgcccggttattaataatg
cggggcattaatacggcggaagaagccgccccattcctgcacgcggatcaacaaccattg
ttggacccaacgaccatgcacgatatggaaaaagccgttgaccgcattcaagaggcgatt
attgccggggatcaaattaccatttacggtgattatgatgcagatggtttaacaagtacg
tcaattatgtatgaaacgttggaccaaattggcgctaacgtgaattactatattccagat
cgtttcaaggatggttatgggcctaatcaggccgcttttgaccggctgattgcggctgga
acgaagctgtttgtgacggtggacaacggtgtcgcgggaaatgcggtcatcaatcaagtg
caggaacagggcatcgatgtcgtggtgaccgatcatcatgagttaccgactgaattgccg
cacgcttacgccattgtccatccacgacatccagagggcagttatccatttggtggtctt
tctggtgccggtgtggcgtttaaagtagcgacggcgctacttgaggaagtacccgaggag
ctattagatctggctgctattggaacggttgctgatttggtcagcttaactggtgaaaat
cggactttggtaacgctcggcctgaaggtcttacagcagacgacccgcccaggcttggcc
gcactgattcaagaagctggactgattcccgataaattgaccgagaccaatatcgggttt
ggtattgcccctcggctaaacgcacttggccgtctgcagtcggcgcagagcggtgtagaa
ttattgacaactttggatgatgagcgggcgaccgcgctggccaaacaggtcaatcaattg
aatgaaaaacgccaaggattggtcaagacaatcagtgccagtgcaatcgagcaagcacag
acgtcggaaaatgaggcccgtcaaaccttagttattaccgggcatggttggcacgagggt
gttttgggaatcgtcgcgagccacgtggtcgaaacgactggcaaaccaaccctagtgtta
aatgaggatgatggtggccggctcaaaggtagtggccggagcgtcgaagcgtataattta
tttgccgcgatcgacccagttcgggagtcattggtggcttttggcggtcatcatatggcg
gttggactaactgtcatggccgaccagttagcaacgcttaaagaggcgatggaagcggcg
gcgggtcagcaattagcagacaatgcgcaagtcagtttaccaattgacggcacgttacca
ttagctgaggcaaccttggcaactctggcagatattcaagcgttggccccctttggaacg
gataacccggcaccgttgtttgaattagttccaacgactgttccgcaagcacgcgcgatt
ggtagtgatcagcaacacttgaaattacaactgggtgatggcaccaatacgattgatgct
atcggtttttcgatgggtactgccttgccggctattcaggcgagtcccaccgatgtgacg
ttagtgggtgagttgagtgaaaatacttggaacggtcagacgaagccccaaatcatggtt
aaggatattgcagtgacggggacccaggtgatcgacgcccggacgcaacatctttcggcc
catttgtttcaagcaccgggggtttacctctttttccaccagcgtctgttgaaaaaagtt
gaacagtatttaggttcccaagcgcaagccgtatgggtgggggatacgaaaacggatctg
actgccgtgacggctaatcaagcggtcttcattgtcgattgtcctgacacgctggcggat
atgacccaggtactcagcacaattgcgctcgatcagctgacgctctacttatatcggcaa
gaatcggtttatttaacgggaatgccaaatcgcgcgcagtttgcgaaacttttccagttt
accgcagcgcaccatgatgttgatattcatcatcaattaacattagtggccaagcatctg
catattgaacgaaatttgcttattttcatgattcaggtgttttttgaggtcggatttgtt
aaaataaatgatggtgtcatgaatggcgtttcgaatccggcaaaagcggatttacatcac
gcccctagttatcagctgcgcgaacaacaaatcgttgctgaagaaacgcttttatatagt
aaatctgcagcgctccaagtatgggtgaagaaccaggctgcggttaagaattga
DBGET
integrated database retrieval system
