Lactiplantibacillus plantarum B21: SH83_11345
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Entry
SH83_11345 CDS
T03680
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lpb
Lactiplantibacillus plantarum B21
Brite
KEGG Orthology (KO) [BR:
lpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpb03400
]
SH83_11345
Enzymes [BR:
lpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SH83_11345
DNA repair and recombination proteins [BR:
lpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SH83_11345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AJO74890
UniProt:
A0A1E3KU88
LinkDB
All DBs
Position
complement(2405063..2408665)
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AA seq
1200 aa
AA seq
DB search
MSLQFVLGPAKMDHRRTMVAQLVATLMAKPQDQFFYLVPNHIKFDTEVDVLNRLAQAFGQ
PDLYAQTQVQVFSFTRLAWYLMKNEAAYQVPRLSAAGIDMLLYRILQRHADELRLFGGEI
SQTGFVTQLAREINELQTANLQPEDVVQLAANAQAGDLQAKLHDLAIVYKDFVAATADKY
LKPADILVQLNAYLRRQDLHGTHVYVELAGFAQLPAQEQGIVTTMLEQGADVTISLMLDH
KVVDRAPENGTLFYQSGRLYYRLYQYARIRQIPVSQDIYAETPRVAPGLVALDDFWRGQP
QAATGYEEPNTNVHLFRTDSRQTELAQVGRMIRAMVAKKHADPADDYHYRDFLIMTRHLD
AYQTMLAPTFHELEIPYFVDLQRSMADHPLVELINALFDIDAQQYQYRDVMRVLKTELLM
PNINGQPMDRQAYRQAVDLTENFILKSGYHGQRWVQREDWQYFQLTEGDAGVETDQNAEI
SRQINLIHHFVAETLPPFFKKMRQAPDGKAAVTLLVNFLTSQGVTDQLLAWRDQALDRQD
VRAAAEPEQTWQTFCGMLDEYVTILGAEPFEITDFLALLQAGFEGASYSQIPSTLDQVLI
SESGMVQSQDHKVVFMVGATDLVMPDRIMTNNLLSDVDKENLQPTLSSLDGDHYLNDSAV
VQLGDESCLNYLAFLSARRHLFFSAPLKDDQETDLNWSNYVRRIQRQFNLREHTYLGTPD
PTNADARPFVGTKRRTISHVIQVYRDVLTTNTDRNRVGAPLQPAPVWVWLRQQLTRDPQF
GELARQLMAGLSYRNQPVKLTPASVEALYGHQIYTSISKLEEFYRNQYAYFLKYGLKLRE
RDVFELSAASTGEFFHAVLDGLIKALRSDQIPLAQASDQQLGQYLETVTRQILDQPQFTI
LTSSNRMAYLQRQLINTVRQIAFAIRNQSKLSAAEPKQTEVLFGNVGKEHGLKALDFQID
ATHSVHVRGKIDRLDQIQVADQSYLGIVDYKSSQHKFDFQEAYYGLAMQMLTYLDAVLHN
EQALVGSDQAAVKLAGALYMHIQNPTLKPKDIQGGFEAALLKKNKYKGILLDDPQLLEHL
DSELQQGNGTSKVYPFARKKDGSYSGGRAASLVTNDQLERLLQHNSQLIIAAAEAIFAGE
IQLNPIRLNDKTTALQYSPYLSIMQFDAMLAENAYRDLPPLSAKQVLDLLKTQKGGENHE
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttacaatttgtattgggaccagccaagatggaccatcgccgtactatggtggcg
cagttagtggcaaccttgatggctaagccacaagatcagtttttttatttggtaccgaac
catattaagttcgatactgaagttgacgtgttgaaccgcttggcacaggcatttgggcaa
ccagatttgtatgcccagactcaggttcaggtcttttcatttacccgtcttgcttggtac
ttgatgaagaacgaagcagcttatcaagtaccacgactctccgctgctgggattgacatg
ctattatatcgcattctacaacgacatgccgatgagctgcgattgtttggtggtgaaatc
tcgcaaacgggttttgtgactcaactagctcgtgaaattaatgagttacagaccgctaat
ttgcaaccagaagatgtggttcaattggcagcgaatgctcaggcgggtgacttgcaggct
aagctacatgatctggcgatcgtttacaaagacttcgtggcggcgactgcagataagtat
cttaagcccgctgatattctcgttcaattgaatgcttacttacggcgtcaagacttgcac
ggaacgcacgtttatgtggaactcgctggctttgcccaattaccggcccaggaacaggga
atcgtcacgactatgctggaacagggcgcggacgtgacaatcagtttgatgctcgatcac
aaagtcgttgaccgggcgccagaaaatggcacgctgttttatcaatctggtcggctttat
tatcggctttatcagtatgcccgtattcgtcagattccggttagccaagatatttatgct
gaaacgccgcgcgtggctcccggcttagtggctctcgatgatttttggcgtggtcagccc
caagcggctaccggttacgaggagccgaatacgaatgtgcatttattccggaccgatagt
cgacagaccgaattggcacaagttggccgcatgattcgggcaatggtcgcgaaaaaacat
gccgatcccgccgacgattatcattatcgggacttcttgatcatgacacggcacttagat
gcctaccaaacgatgttagcgccgacttttcatgaattagaaataccatactttgttgat
ttacagcgttcaatggccgaccatccgttagttgagttgattaacgcgttgtttgatatc
gacgcacagcagtatcaatatcgtgatgttatgcgagtgttgaaaaccgagctgttgatg
ccaaatatcaatgggcaaccgatggatcggcaagcctaccgccaagcagtagatctgacc
gaaaactttatccttaaaagtggttatcacggccagcggtgggtacaaagggaagattgg
caatactttcaattaaccgagggtgatgccggggtcgagacggaccaaaatgctgaaatt
tcgcgacaaatcaacttgattcatcactttgttgctgaaacgttaccaccgttttttaaa
aaaatgcggcaagcaccggatggcaaagcggccgtgacattgctggtcaactttttgaca
agccagggcgttacggaccagctattagcttggcgtgatcaagccttggatcgccaagat
gtccgggcagctgccgagcctgagcagacctggcaaactttctgtgggatgctagatgaa
tacgtgacgattttaggtgcagagccatttgaaattacggactttttggcactattacaa
gcgggctttgaaggtgctagttactcgcaaattccgtcgacgttggaccaggtgttaatt
tcagagagcggaatggttcaaagtcaggaccataaagttgtcttcatggttggggcaacc
gatttagtgatgcctgaccggattatgacgaacaacttattgagtgatgtggataaagaa
aatttgcaaccaacgctcagttcgttagatggtgaccactatttaaatgattcagctgtc
gttcagctcggtgatgaaagttgtctgaattatttggcctttttaagtgcccgtcgacac
ttgtttttcagcgccccgttaaaagatgatcaagaaacagatttaaattggtccaactat
gtgcggcgaattcaacgccagttcaatttgcgagaacatacttatcttgggacgcctgat
ccgactaatgccgatgcgcggccatttgttgggactaagcgccggacgattagtcatgtg
attcaggtttaccgcgatgtgttaacgacgaatactgaccgtaatcgtgttggcgcacca
ttacaacctgctccggtgtgggtgtggttacggcaacaattgacgcgtgatccccaattc
ggtgagctagcacgtcaattgatggctggattaagctatcgcaatcaacctgtcaagctg
acaccagccagcgttgaggctttgtatgggcatcaaatttatacgtcaatttcaaaacta
gaagaattttatcgtaatcagtacgcttatttcttgaaatatgggctcaaactgcgtgag
cgtgatgtgttcgagttatcagctgctagtactggggagtttttccacgctgtcttagat
gggctcatcaaggcgttacggtctgatcaaatcccattggcccaagccagtgatcagcag
ttaggacagtatttagagactgtgacccgtcaaatcttagatcaaccacagtttacaatt
ttgacgagttctaaccggatggcttacttgcaacggcagttaatcaacacagtccggcag
attgcatttgcgattcgcaatcaaagtaaactgtcagccgctgaaccgaagcaaaccgag
gtcttatttggtaacgttggcaaggaacacggattaaaagcgctcgattttcaaattgat
gcaacgcatagtgtgcacgtgcgggggaagattgaccgtctcgaccaaattcaagtggca
gatcaaagttacctgggaatcgtcgattataagtcatcccaacataaatttgattttcaa
gaggcttactatggtctcgcaatgcaaatgttaacttatttggacgctgtgctgcataac
gagcaagctttagtcggttctgatcaagctgcggttaaattagctggcgcactttacatg
cacattcaaaatccaactctgaaaccaaaagatattcagggcggttttgaagcagcactc
ctaaagaagaacaagtataagggaattttgctcgatgatccgcagttattggaacattta
gatagcgaactacaacaaggtaacgggacctcgaaagtttacccattcgcacgtaaaaag
gatgggtcgtatagtggggggcgtgcagcttcactggtgacgaatgaccagttagaacga
ttattacagcataatagtcaattgattattgcagctgctgaagcgattttcgctggagaa
attcaactaaatccaattcggctgaacgataagacgactgctttacaatattcgccgtat
ctatcaattatgcagtttgatgcaatgttggcagaaaatgcttatcgggatctaccgcca
ttatcagccaaacaggttcttgatttactgaagacacagaaaggtggagaaaaccatgag
tga
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