Lactiplantibacillus plantarum B21: SH83_12240
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Entry
SH83_12240 CDS
T03680
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lpb
Lactiplantibacillus plantarum B21
Pathway
lpb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SH83_12240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpb03400
]
SH83_12240
DNA repair and recombination proteins [BR:
lpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SH83_12240
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SH83_12240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
AAA_29
AAA_21
SMC_N
DnaJ_CXXCXGXG
AAA_15
AAA_16
AAA_25
HypA
nSTAND3
ATPase
RsgA_GTPase
AAA_23
DUF4350
DUF463
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AJO75057
UniProt:
A0A0G9FA93
LinkDB
All DBs
Position
2604546..2607053
Genome browser
AA seq
835 aa
AA seq
DB search
MPQTTLPTHIQVRGAHVNNLKNIDIDIPLNEFVAITGRSGSGKSSLAMGVLYAEGARRYL
NALSTFTRRRINQVGKASVDSVQYLPSALALRQRPQVPGVRSTVGTMSESLNILRLAFSR
LSSAVCPNGHRMPPTLDVAENDGYVTCPTCGAKFRAPGAEDFAFNSGGACPTCGGLGQVR
QIDPALIIADENQTIEEGAVASWHLPGRNFMPIVAREIGIPIDIPYKDLSEADKARVLHG
PKQTVAINIPSAKGKIFHMDNAVYENAFAAVEDSMATTKNERAITRLNRFYKFDTCPDCH
GSRFNPQLFNYELNGQNIATVSDMTVAALHDFAATIVPWLPTKMHHLGQSLVDELLLSLQ
PMEELGLDYLTLSRPGATLSTGELQRIQLGRTLRSATTGVLYVLDEPSVGLHPANVAGLI
KAFRGLVAQGNSVVVVDHDTSIISAADDVIEIGPGAGKHGGTVVGQGTVAAIKQDKESLI
APFLTGTATLRERPVLTDDALWKKGALAIEVAHHFNIQDITARIPKNRFTTVTGMSGAGK
TTLVLDSLIPALIATAKKRPLPTHVKAFDNGHIRHVVTVDSVPVGKNVRSTVATYTNILD
HLRQLFAATPAAQANGWTASQFSYNVAAGACPTCGGTGQISLDVQYLPDITEVCPQCHGK
RYNKQTLTVKWHGYSIADILDLAVDEALPIFKAQSAIANTLQILHDMGLGYLLLGESTPA
LSGGEAQRLKLTSRIGKRQTGTLFVFDEPSVGLHPLDIQQLVKVFDQLIQQGATVIAIEH
DLDVIANADYVIDMGPAGGINGGNIVATGTPLAVSQNPTSVTGQYLKTHLALFHV
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaaccacgttaccgactcacattcaagtgcgaggcgcacacgtcaataattta
aaaaatatcgatatcgacattccactcaacgaatttgttgcgattactggtcgcagtggg
tccggtaagtcatcactcgcaatgggcgtcctgtacgctgagggggcccgccgctactta
aacgccctgtcaacctttacccgccgccgaatcaatcaggtcggcaaagccagtgttgat
tcagtacaatacttaccatctgcattagcgctacgccaacgcccccaggttcccggcgtc
cgttcaaccgtcggcaccatgtctgaaagcttaaatatcttaaggctagccttctcacga
ctcagctcagcagtttgccccaatggtcaccgcatgccaccaacgctcgatgtggctgaa
aatgatggttacgtcacctgtccgacttgtggcgccaaattcagagcgcccggcgccgaa
gatttcgccttcaattcaggtggggcctgtccgacttgcggtggcctaggccaagttcgc
caaattgacccggcactcattattgcggatgaaaatcaaactatcgaagaaggggccgtt
gcttcttggcacctacctggacgtaactttatgccgatcgttgcgcgcgaaattgggatt
cccatcgacattccatataaagaccttagtgaagccgataaagcacgcgtattacatggt
cctaagcaaaccgttgccatcaacattccaagcgctaaaggtaaaatctttcacatggac
aacgctgtctacgagaacgcctttgccgccgttgaagatagtatggcgacgaccaaaaat
gaacgggcaattactcggctgaatcgcttttacaagtttgatacttgtccagattgtcac
ggatcacgcttcaatcctcagttgtttaactacgaattaaatggtcaaaacattgcgacg
gttagtgatatgactgtcgccgccttgcatgattttgcggccacgattgtcccgtggcta
cctactaagatgcatcatcttggacaatcccttgttgatgaattgctactcagcctgcaa
cccatggaagaacttggactcgactacctcacactcagtcgccccggcgcgaccctgtca
actggtgaattacaacgcattcagcttggacgcactttgcgtagcgccacgactggcgtg
ttatatgtccttgatgaaccttccgttggacttcatccagctaacgtggcgggcctaatc
aaagctttccgcgggctagtcgcccaaggaaattccgtcgtggtggttgaccacgacact
agtattatcagtgcagctgatgatgttattgagattggtccgggggctggtaagcacggc
ggtaccgttgtcggacaaggcactgtcgcagccatcaagcaggacaaagagtccttaatt
gcgccatttctcaccggtactgccacgctgcgtgaacgccccgtattaaccgacgatgcg
ctctggaaaaagggggcccttgctattgaagtggctcatcactttaacatccaagacatt
acggcgcgcattcccaaaaaccgtttcacgaccgtcacgggtatgagcggcgctggtaaa
acgactctggtactagatagtttgattccagcactgattgccacagctaaaaagcgacca
ctcccaacccacgttaaggcctttgacaatggtcacattcggcacgttgttaccgtcgac
tcagtgcccgttggtaagaatgtacggtcaacggtcgccacttataccaacattctcgac
catctacgccaattattcgccgccaccccagcagcacaagcaaacggttggaccgctagc
caattttcatataacgtcgctgcgggtgcttgcccaacttgtggtggtacgggccaaatc
tctttagatgtgcaatacctgccagacatcaccgaagtctgcccccaatgccacggcaag
cgctacaataaacagacgctgaccgtcaaatggcatggctattcgattgcggatatttta
gatctcgcggttgacgaggcactaccaattttcaaagcgcaatccgccatcgctaataca
ctccagattctgcatgatatgggactaggctacttactattaggtgaaagtacgccggca
ctctcgggtggcgaagctcagcgcctgaagctcacctcccgcattggcaaacgccaaacg
ggaacgctctttgtcttcgatgagccttcagtcggtttgcacccgctcgacattcagcaa
ctcgtcaaagtctttgaccaactgattcagcaaggggcaaccgtcattgccatcgaacac
gatctcgacgtaatcgccaacgctgattacgttatcgatatgggacccgcgggcggtatc
aacggtggtaacattgtcgccaccggtaccccattagccgttagtcaaaatccaactagt
gtaacagggcaatatttgaagacgcatttggccctattccacgtttaa
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integrated database retrieval system
