Legionella pneumophila Corby: LPC_0327
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Entry
LPC_0327 CDS
T00532
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase, DEAD box family
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lpc
Legionella pneumophila Corby
Pathway
lpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPC_0327 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpc03019
]
LPC_0327 (rhlE)
Enzymes [BR:
lpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPC_0327 (rhlE)
Messenger RNA biogenesis [BR:
lpc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPC_0327 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
UTP25_NTPase-like
Exotox-A_bind
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ABQ54322
LinkDB
All DBs
Position
complement(351367..352611)
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AA seq
414 aa
AA seq
DB search
MSFKQLALIEPLNRAVSELGYTNPTSIQLKAIPLILNGHDLLGSAQTGTGKTASFVLPIL
QKASQQTQTSRNRVKVLILTPTRELAIQVHESIIQYGKYLTLRSAVIYGGVKSHNQIKQL
DSGLEILVATPGRLLDLYQQGAVKFDEIDTLVLDEADRMLDMGFIHDIKKIIKLLPLKRQ
NLLFSATFTPEVRTLARNILNKAVEIDIAPRNTAVKTIKQTVYSVDRNHKLALLSHLLHK
NNWGQTLVFSRTKHGANKLVKQLAESQIYSVAIHGNKSQAQRTKALADFKSGKVQTLIAT
DIAARGIDIEKLACVVNFDLPHVPEDYVHRIGRTGRAGASGLAVSLVSTEEIKLLLSIEK
LINQKLERIKIKDFEFLHNFSDLVSAKIQKFAPPKAGYKGNISRKSRTAFNKSA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaacaattagcgctgattgagccgctaaacagggcggttagtgagttaggc
tacactaaccctaccagtattcaattaaaagccatcccgctcattttaaatgggcatgat
ttacttggttccgctcaaacaggaacaggaaaaacagcaagctttgtattgcctatcttg
caaaaagccagtcagcaaactcaaacaagccgtaatcgagttaaagtactgattttaacg
cccacacgagaattagccatccaggtccacgagagcataatccaatatggcaaataccta
acactgcgctcggctgtgatttacggaggagtaaaaagccacaaccaaattaaacaatta
gactcaggccttgagatacttgttgcaaccccgggaagattattggatttataccagcaa
ggtgctgttaaatttgatgagattgacaccctggtactcgatgaggcggatagaatgctg
gatatggggtttattcatgatataaaaaaaattatcaaattattacctttaaaaaggcag
aacctgcttttttcagcaacatttactcctgaggtacgtactttagccagaaatatactg
aataaagcggttgaaattgatatcgcaccgagaaataccgcggtaaaaaccataaaacaa
actgtttattcagtagatagaaaccataagttagcccttctgagtcatttacttcataag
aataactggggacaaactttggttttttctcgaaccaaacatggagccaataaactggtt
aagcaactggccgaatcccaaatatattcggttgctattcatggcaacaaatcacaggct
caacgaacaaaagccttggctgatttcaagtcaggcaaagtacaaacattaattgcaaca
gacatcgcagcacgtggcatagacatcgagaaacttgcctgcgtagtgaattttgacctg
cctcatgtgcctgaggactacgttcatcggattggacgaacaggacgggcaggcgcctct
ggattggctgtatccttggtcagcacagaagaaatcaagctgctgctgtctatagaaaaa
ttaatcaatcaaaaactggagcgcattaaaattaaggattttgagtttttgcataacttt
tcagatttagtctcagccaaaattcaaaaatttgcgccgccaaaagcgggatataagggc
aatatcagcagaaaatccaggacggcttttaataaaagcgcgtaa
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