Legionella pneumophila Corby: LPC_1814
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Entry
LPC_1814 CDS
T00532
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lpc
Legionella pneumophila Corby
Pathway
lpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPC_1814 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpc03019
]
LPC_1814 (deaD)
03009 Ribosome biogenesis [BR:
lpc03009
]
LPC_1814 (deaD)
Enzymes [BR:
lpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPC_1814 (deaD)
Messenger RNA biogenesis [BR:
lpc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPC_1814 (deaD)
Ribosome biogenesis [BR:
lpc03009
]
Prokaryotic type
rRNA helicases
LPC_1814 (deaD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Helicase_C_2
Cas3-like_C_2
AAA_19
adh_short
Motif
Other DBs
NCBI-ProteinID:
ABQ55747
LinkDB
All DBs
Position
complement(2761990..2763759)
Genome browser
AA seq
589 aa
AA seq
DB search
MNQEISNFSTFNFSSALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAF
ALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLK
QLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEK
KQMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRFLFASVHQKPDALIRVL
EVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDILV
ATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRAGRSGVTILFVTPKESRLISSI
ERHTRQRIEKVQVPNDHMIQMARQQRFMSNITTRLNHEHVYSYKRIVEEYIKEHDVSAVD
VAAALALLLHKDMPWRKELNMPKAVSAFKEERARAGEKGLDLRGRFKEDRKSSFADRKGA
RGSKKDFAKDFSNERKKFNDGRKAVNQESVAQDLFRIDVGKIHGVKPGNIVGAIANEAGL
QSRYITGLKIHEDHSTVRLPKGMPKEVMKDLTKAWVCGRQLNLTLIGSA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaaatatcaaacttctctacttttaatttttctagtgctttaaataaagcg
ttagaagatatgaagtttattacgccatcgcctatccaggctcaaaccattcctttgata
ttgcaaggtcgggatgccattgctcttgcgcaaactggtacaggcaaaacagcggctttt
gcattaccaattttgcaaaatttgtctcctgagatatctaccactcaggctttaatttta
gcccctactcgtgaattggcaatccaggttgcagagcaatttgaattattaagcaagtac
caacgcaatgtgacgatcgccgttctttgcggtgggcaagaatatggtcgtcaattaaaa
caattgcgtagtggtgcgcaagtggttgttggaacgccaggacgtattctggaccatatc
gataaaggcaccttgctcttaaataatctgaagacatttattcttgatgaagcagatgaa
atgttgcgtatgggtttcattgaagatgtagaaaccattttagaaaaactgcctgaaaaa
aagcaaatggcattgttttcagcaaccatgccctatcgaattcgtcaaatagccaatact
tatttgaatgaccctgcctcaattgaaatccgtatggaaactgcgacggtcaagtctatt
gagcaacggtttttatttgcttccgtacatcaaaaaccggatgcgttaatccgggtcttg
gaagtggaggattatcaaggggttatcgtttttgtacgcactaaaagcagtactgaggaa
gtagcagaactattgcaacaacatggattaagagcaatggcaattcatggtgatattact
cagtctttgcgtgagcggattattgcccaatttaaacaaggagcgattgatatccttgtg
gcgacggatgtcgctgcaagaggtttggatgtcgagcgagttactcatgtgattaattat
gatatgccacatgacaatgaaacttatgttcatagaattggcagaacagggagagctggc
cgttctggtgttacgattttatttgtaacccccaaggaatcgcgtttaatttccagcatt
gaacgccataccaggcaacgaattgagaaagttcaagttcctaatgaccatatgatacag
atggctcgtcaacaaagattcatgtctaacattacgactcgactgaatcatgagcatgtg
tattcctacaaaaggattgtggaagaatacattaaagagcatgacgtatcagcagtagat
gttgcggctgctcttgctttattgctgcataaagatatgccttggagaaaagaattaaat
atgcctaaagcagtttctgcattcaaagaagagagagctcgggcaggagaaaaaggattg
gatttacgtggtcgatttaaagaagatagaaaaagttcttttgctgatcggaaaggtgcg
cgaggaagcaagaaagattttgccaaagacttttctaatgaaagaaaaaaatttaatgat
ggcaggaaggccgttaatcaagaatcagtagctcaggatttatttcgtatcgatgtaggc
aaaattcatggagtcaaacctggcaacatagtaggggctattgctaatgaggctggcttg
caaagccgatatattactggtcttaaaattcatgaagatcactctactgttcgtttacca
aagggtatgcctaaagaagtgatgaaggacttaaccaaggcttgggtttgcggccgccaa
ctcaatttaacattaattggtagtgcctga
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integrated database retrieval system
