Legionella pneumophila Corby: LPC_3240
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Entry
LPC_3240 CDS
T00532
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
lpc
Legionella pneumophila Corby
Pathway
lpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPC_3240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpc03021
]
LPC_3240
03019 Messenger RNA biogenesis [BR:
lpc03019
]
LPC_3240
Transcription machinery [BR:
lpc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LPC_3240
Messenger RNA biogenesis [BR:
lpc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LPC_3240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
ATPase_2
AAA
Motif
Other DBs
NCBI-ProteinID:
ABQ57127
LinkDB
All DBs
Position
complement(3492717..3493979)
Genome browser
AA seq
420 aa
AA seq
DB search
MNLSELKQLPIADLVNIAQEMGVENTSRMRKQDIIFAILKAHALKGEDIHGDGVLEVLTD
GFGFLRSADGSYLAGPDDIYVSPSQIRRFGLRSGDTISGKIRPPKDSERYFALLKVDQIN
YDTPDSAKRKILFENLTPLFATERLVMEQGNGSTEDLTARVVDLCAPFGRGQRGLIVSPP
KAGKTLMLQNIARSIEKNYPECYLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPANRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRL
YGAARNIEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMEIHLSRNIAERRVFPAINI
NRSGTRREDLLLSPEELQRTWILRKILQSMDECDAIEFLLERMKNHKTNAEFFDAMKRQE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttagtgaacttaagcaattacctattgccgatctcgttaatatcgcacaagag
atgggtgtggaaaatacctcccgtatgcgcaagcaagacatcattttcgccatccttaaa
gcccatgctttaaaaggggaagacatccatggcgatggtgttttggaagttttgactgat
ggttttggtttcttgcgttccgctgatggctcctatctggcaggccctgatgacatttac
gtctctcccagtcaaatcagacgtttcggtcttcgttcgggggatactatttctggtaaa
atccgcccccccaaagacagcgaacgctattttgctttattaaaagttgatcaaattaac
tacgatacaccggatagcgcaaagcgtaagattttatttgaaaacttaactcccttgttt
gctaccgagcgcctggttatggagcaaggtaatggcagcacagaagatctcacggcaaga
gtagttgatttatgcgctcctttcggccgcggacagcgtggtttgatcgtgtcacctccg
aaagcaggtaagacattgatgttgcaaaacattgctcgctctatagaaaaaaattatcct
gaatgttatctcattgttttgctgattgatgaacgtcctgaagaagtaacggaaatgcaa
cgttctgtcaaaggggaagttgttgcgagtacttttgacgagcccgccaatcgccatgtc
caggttgccgaaatggtaatagaaaaagcaaaacgtctggttgagcataaacgtgatgtg
gttattctgctggattcgatcactcgcctggccagagcttacaatacggttgtaccggca
tcaggtaaagtactgactggtggtgttgatgcgaatgccctgcaaagacccaagagattg
tatggtgcggcacgtaacatagaagagggcggcagtttaactattattgcaacggctctg
gtagacacgggttccaaaatggacgaagtgatttacgaagagttcaaaggtacaggtaac
atggaaatccacttgagtcgtaatattgccgagagaagggttttccctgcgattaacatt
aatcgctctggtactcgccgtgaagatctcctgttgagtcccgaagaattacagcgcacc
tggatattgcgtaaaatcctgcaatccatggatgaatgtgatgcgattgaattcttattg
gaacgcatgaagaatcataagacaaatgccgaattctttgatgcaatgaagcgtcaggaa
taa
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