Secundilactobacillus paracollinoides: AYR62_03805
Help
Entry
AYR62_03805 CDS
T04675
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lpd
Secundilactobacillus paracollinoides
Pathway
lpd00260
Glycine, serine and threonine metabolism
lpd00460
Cyanoamino acid metabolism
lpd00630
Glyoxylate and dicarboxylate metabolism
lpd00670
One carbon pool by folate
lpd00680
Methane metabolism
lpd01100
Metabolic pathways
lpd01110
Biosynthesis of secondary metabolites
lpd01120
Microbial metabolism in diverse environments
lpd01200
Carbon metabolism
lpd01230
Biosynthesis of amino acids
lpd01240
Biosynthesis of cofactors
lpd04981
Folate transport and metabolism
Module
lpd_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AYR62_03805 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AYR62_03805 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AYR62_03805 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AYR62_03805 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AYR62_03805 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AYR62_03805 (glyA)
Enzymes [BR:
lpd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AYR62_03805 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
CTP_transf_like
vRNAP_dom
Motif
Other DBs
NCBI-ProteinID:
ANZ63311
LinkDB
All DBs
Position
892673..893932
Genome browser
AA seq
419 aa
AA seq
DB search
MNYREQDPKLWQAIVNEEDRQQHNIELIASENIVSQAVRAAQGSVLTNKYSEGYPSKRYY
GGNEYVDVVENLAIDRAKELFGAEYANVQPHSGSQANQAVYAAFLKPGDTILGMGLDSGG
HLSHGAKVNFSGKLYQAYSYGLNPDTELLDYDMIRDLAKQVKPQMIVAGASAYSRIIDWQ
AFRDIADEVGAYLMVDMAHIAGLVAAGLHPSPVGIADVVTTTTHKTLRGPRGGLILSQEK
YAKQINSAVFPGTQGGPLEHVVAAKAAMLNEDLQPAFKDYAAQIIKNAQAMADVFNKSKT
IRVVSGGTDNHLMTLDLTKTELNGKQTQELLDSVLITTNKESIPNEPLSPFKTSGIRLGT
PAITTRGFKEDDAAQVAELIVKAVENHADAAVLDEVKIAVRALTDAHPIDANVAEIEFK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttgaactatcgagaacaagatccaaaattatggcaggccatcgtaaatgaagaagatcgc
caacaacataatattgaactgattgcttctgagaacattgtttcgcaagctgtgagagct
gctcagggttccgttttgaccaacaaatattcggaaggttatccgtctaaacggtactat
ggtggtaacgagtacgtcgacgtggttgaaaacctggccattgaccgggccaaagaactg
ttcggcgccgaatacgcgaacgttcagccacattccgggtcacaagccaatcaagccgtg
tacgccgcctttttgaagcccggcgacacgatccttggcatgggactggattccgggggc
cacttatcccacggagcaaaggtcaactttagcggcaaactctatcaagcatacagttat
gggttgaatcccgataccgaattgttggactatgatatgattcgtgatctggctaagcag
gtcaagccgcaaatgatcgtggctggggcctcagcatatagtcgcatcatcgactggcaa
gctttccgcgatattgcggatgaagtaggcgcctatttaatggtcgatatggcgcatatt
gctggcctagttgctgccggtctgcacccgtcaccagttggcattgcagacgtggtgaca
acgacgacgcataagacattgcgtggtccccgtggtgggctgatcctgtcacaggagaag
tacgccaagcagatcaactccgcagtctttcctggtacgcagggtgggccattagagcac
gtggtggctgcgaaggctgcaatgctcaatgaagatctccaaccggccttcaaggactat
gcggcgcagatcattaagaatgcgcaggctatggcagacgtgtttaacaagagcaagacg
attcgcgtcgtttctggtggcactgacaaccatttgatgacactcgatctcactaagact
gagttaaacgggaagcaaacacaggaattacttgattctgttttgattacgactaacaag
gaatccattccaaacgagcctttgagtccgtttaagacgtcgggtattcggttgggaacg
cctgctattacaacccgcggattcaaggaagatgacgctgcacaggtcgcagaactcatt
gtgaaggctgttgagaatcacgcagatgcagctgtcttggatgaggttaagatagcagtt
cgtgctttgacggatgcccatccaattgacgctaacgtggcagaaattgaatttaagtaa
DBGET
integrated database retrieval system