Secundilactobacillus paracollinoides: AYR62_04375
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Entry
AYR62_04375 CDS
T04675
Name
(GenBank) penicillin-binding protein
KO
K08724
penicillin-binding protein 2B
Organism
lpd
Secundilactobacillus paracollinoides
Pathway
lpd00550
Peptidoglycan biosynthesis
lpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYR62_04375
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpd01011
]
AYR62_04375
Peptidoglycan biosynthesis and degradation proteins [BR:
lpd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AYR62_04375
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Beta-lactamase2
LuxQ-periplasm
Motif
Other DBs
NCBI-ProteinID:
ANZ63391
LinkDB
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Position
1003151..1005307
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AA seq
718 aa
AA seq
DB search
MKQSPKRTVTSQQAQRNRRVFGRVLFLIITGVFVLFIARFSYIAIGKNVEHVNLSARAQK
LYTATQTVKAQRGTIYDDSNQPIAEDTSTYSLYAVLDKTQRSTDGRPMYVQNKKKTATVL
AKYLPISKKRALAYLTPSNAKTFQVEFGLAGQNISLTTRNKIEQAHLTGLNFVQQQARLY
PNGVFASYLVGNTATNSKGVLTGTMGLESQYNSLLTGTNGFKTEKQDNNGYKIPGTTQKD
KKAKNGDDVYTTLDSRLQTLLETEMSALQSKTHSKSLNAVLMNAKTGEIVASTQRPTFNP
ETGAGLGTDGTWRDSLVQDLYEPGSTMKVFTMAASIDSGNYNGNATYQSGKYTVGGQVVP
DWQTSGWGIITYNKGFALSSNVAMAHLEQQMGAKTWMKYIKRFKFLKSTNFGLPGEQAGS
IQFSKAIEQADTAFGQGIQVTAIQMLQGLSAIANNGKMLKPYLVRKVVDPNTGKTVKSYG
TKVIGHPVSAATAKAVRKHMEDVVYKSYGIGGDYKIKGVRIAAKTGTAQVSNGKSGYLSG
DDSYLYSVAAMAPAKNPKYIMYITMKQPTLPGTETATQLLADVFKPVMKRALLEDSSSSS
TETSTKMVSYVNRSAKAAEETLTKAGYKVTVLGSGNRVVKQSPESGQVMMEGQRVILLTS
GAQKMPSISGWSKSDILRLADLLGMKVTFTGNGYAKTQSIKAEQAVSDEEQLKVSLGN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatcacctaagcgaacggtgactagtcaacaagcacaacgtaatcggagagtc
ttcggacgcgtcctatttctgatcattacgggtgtgtttgtactattcattgctcgtttt
tcttatatcgcaattggaaaaaatgtggaacacgtgaacttatccgcgcgggcccaaaaa
ttgtacacggcaacacagacagtgaaggcacagcggggcaccatttatgatgactcgaac
cagccgattgccgaggatacaagtacctattcgttatatgccgttttagataaaacgcag
cggagtacggatgggcgcccaatgtatgtgcagaataagaaaaaaaccgccactgtttta
gccaagtatctgcccattagcaaaaagcgggcgttggcttatttaacgccgtcaaatgcc
aaaacgttccaagttgaatttgggctggccggtcaaaatatttctctgacgaccagaaac
aaaattgagcaggcgcatctaaccggccttaattttgtccagcaacaagcccgtctttat
ccaaacggtgtgtttgcttcttacttggtggggaacactgccactaacagcaagggcgtt
cttactgggacgatgggccttgaaagccagtataacagtctgttaactgggaccaacgga
ttcaagacggaaaagcaggataataacggctacaagattccgggcacgacccagaaggat
aagaaggccaagaacggcgacgacgtttacacaacgttagattcacgtctgcagacgctg
cttgaaaccgaaatgtcggcgcttcaatcaaagacgcattccaagtcacttaacgccgtc
ttaatgaatgcgaagactggggaaattgtggcgtcaacgcagcgaccaacgtttaatcct
gaaacgggtgctggtctgggaacggacggcacctggcgggatagtcttgttcaggacctg
tacgaaccagggtcaacgatgaaggttttcacaatggccgcttcgatcgacagtggcaac
tataacggaaacgcaacgtatcaatccgggaagtatactgtcggcggtcaagtggtgcct
gactggcagacgtctggttggggaatcattacctataacaaggggtttgcgctttcaagt
aacgttgcgatggcgcacttggaacaacagatgggcgctaagacttggatgaaatacatc
aaacggttcaagttcctcaagtcgaccaactttggtcttcccggggaacaagccggcagt
attcaatttagtaaggccatcgaacaggccgatactgcctttggtcaagggattcaagtc
acggccattcagatgctgcagggattgtctgctattgcgaacaatggtaagatgttgaag
ccgtatcttgttcgtaaagtggtcgatccaaacactggaaaaaccgttaaatcctatggc
acaaaggtcatcgggcacccggtctccgcagcaactgctaaggctgttagaaaacacatg
gaagacgttgtatataagtcttacggcattggtggcgactacaagatcaagggtgttcgg
atcgcggcaaagaccgggactgctcaggtcagcaacgggaagtctgggtatctgagcggg
gatgatagttatctctactcagttgccgccatggcacccgcgaagaacccgaagtatatt
atgtatattacaatgaagcagccgaccttaccgggcaccgaaacggcgacccagttattg
gcggatgtgttcaagccagtgatgaaacgcgccctgttagaggattcatctagttcctcg
acagaaaccagcactaagatggtctcctatgtcaaccggtctgctaaagcggccgaagag
accctaacgaaggctggctataaagtcaccgtccttggatctggtaaccgcgtcgttaag
cagtcgccagaatctggtcaggtgatgatggagggccaacgggtgatcctgctgaccagt
ggggcacaaaagatgccaagtatcagcggctggtcgaagagtgatattctgcggttggct
gatctgcttgggatgaaggtgacctttacgggcaacggatacgcaaaaacacaaagtatt
aaggcggaacaagccgtgagtgacgaggaacaactcaaggtctcactaggtaactga
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