Secundilactobacillus paracollinoides: AYR62_04805
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Entry
AYR62_04805 CDS
T04675
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lpd
Secundilactobacillus paracollinoides
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpd03016
]
AYR62_04805
Enzymes [BR:
lpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
AYR62_04805
Transfer RNA biogenesis [BR:
lpd03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AYR62_04805
Prokaryotic type
AYR62_04805
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
ANZ63472
UniProt:
A0A1B2J082
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All DBs
Position
1101035..1101979
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AA seq
314 aa
AA seq
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MQIEFLGTGAGSPGKFRNVSSLALRLLEERNSIWLFDAGEGTQHQILRTTIRPRKIDKIF
ITHLHGDHIFGLPGLLSSRSFQGGNEKLTIYGPKGIRNFVLTSLKVSETKLSYYIEFVEI
ENEGEIYSDDKFTVYARKLDHKIECFGYRIEEHDHQGELMVDKLREDQIPSGPVYGQLKA
GKTVTLPDGRVINGHDYIGHAQKGRIIAILGDTRRTPNSSVLAENADVLVHESTFAKDEA
NLAHNYYHSTNMQAANIARDGHVGRLLLNHISARYTGKMALELEKQAKSIFPRTKVVKDF
DLIDIPFDKERQTN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagaatttttaggtacgggtgctggttccccgggaaaatttagaaacgtcagc
agtttggcacttcgcctacttgaagaacggaattcaatttggctgtttgatgccggtgaa
ggcacgcagcatcaaatcttacggacgaccattcggccacgtaaaattgataaaatattt
attacccacctgcacggcgaccatatttttggtctgcctgggttgctgagcagtcgctca
tttcagggtggcaacgaaaaattaacgatttatggtccaaagggcattcgcaactttgtg
ttgacgagcttaaaggtttccgaaaccaagttgtcgtactacattgaatttgttgaaatt
gaaaacgaaggtgaaatctatagcgatgataagtttaccgtctatgcgcgcaagctggat
cataagatcgaatgctttgggtatcgcattgaagagcacgaccatcagggtgaattgatg
gttgataaattgcgggaggaccagattccgtccggtcccgtctacggccagctgaaagct
ggaaaaacggtcacactgcctgacggtcgggtgatcaacggtcacgactatatcgggcac
gcacagaaaggccgaattatcgcgattttaggtgataccagacggacaccgaatagcagt
gtgttggctgaaaatgcggatgtgctggtgcacgagagcacgtttgcgaaggacgaagcc
aatttagcacataactactaccactcaacaaatatgcaggctgcaaatatcgcccgtgac
gggcacgttggtcggctattgctcaaccatatttcggcacgttataccggaaaaatggcg
ttagagcttgaaaaacaggccaagtcgatctttccgcggacgaaggtcgttaaggatttc
gatttaatcgatattccgtttgataaagaacgtcaaacaaactag
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